Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0238 ATGGACTCAAAGCCCCAACCATCAGCTTCAGGTAATGGTCCTCCACCGAAGCCGTGGGAGGGGGCAGCATCCTCATCTGGGGCAGCACCTTTTAGGCCCCCATCAGCAGGTAACACAAGTGATGTGGTTGAGGCTTCAGGAACTGCAAAACCTGGGGAAATAGTTTCTACTTCTGATAGGAGTGCAACTATCAATAGGAATACTCTTGGGAGGCCCCTTCCCACAAGGCCATGGGAACAGAATTATGGAAATACCAGCTATGGAGGTTATGGTTCCACAATGAATTATAATTCTGGATATGGATCTGGAATGTATGGATCCTATGGTGGTGTAGGAGGGTCCTATGGTGGAGGAATGTATGGTAACAGTCTGTACAGGGGAGGATATGGGGGCCTTTATGGGTCATCTGGGATGTATGGTGGTGGAATGTATAATGGTGGCTTTGGCGGTCCAATGGGTGGTTATGGCATGGGTGGTGATCCTTATGGAGCTCAAGATCCCAATAATCCATACGGTGCTCCTCCATCGCCTCCAGGATTTTGGATTTCTTTTCTACGTGTGATGCAAGGTGTGGTTAACTTTTTTGGCCGGATTTCAATTCTCATAGATCAGAACACACAGGCTTTCCATATGTTCATGACTGCACTTCTTCAGAGCAATGTTGCTAAATCTGATAGCCCATTCCCCTCCTCCCCTCCTTCAAGTAGTATGGATATTATTTTAATAATAAGTGGTTACTTGATCTCTTGGCAGCTTTTTGATCGCTCTGGTTTATTGTATGGAGAGCTAGCTAGATTTGTGTTACGGTTGCTTGGAATTAGAACCAAGCCCAAGAAGATTAACCACCCACCAAATCCAAATGGACTTCCACTACCTGCACCACACAATGAGGACTATATTCAAGGAACAAAAGCTGCTCCAAGTGGTTCTTGGGATAGGGTGTGGGAAAATGACGCCAACAAATGA 966 0.4607 MDSKPQPSASGNGPPPKPWEGAASSSGAAPFRPPSAGNTSDVVEASGTAKPGEIVSTSDRSATINRNTLGRPLPTRPWEQNYGNTSYGGYGSTMNYNSGYGSGMYGSYGGVGGSYGGGMYGNSLYRGGYGGLYGSSGMYGGGMYNGGFGGPMGGYGMGGDPYGAQDPNNPYGAPPSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTALLQSNVAKSDSPFPSSPPSSSMDIILIISGYLISWQLFDRSGLLYGELARFVLRLLGIRTKPKKINHPPNPNGLPLPAPHNEDYIQGTKAAPSGSWDRVWENDANK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0238 321 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX13 9 218 IPR035463 GO:0005777|GO:0016021|GO:0016560
Apr5g0238 321 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX13 251 319 IPR035463 GO:0005777|GO:0016021|GO:0016560
Apr5g0238 321 MobiDBLite consensus disorder prediction 39 70 - -
Apr5g0238 321 PANTHER PEROXISOMAL MEMBRANE PROTEIN 13 9 218 - -
Apr5g0238 321 PANTHER PEROXISOMAL MEMBRANE PROTEIN 13 251 319 - -
Apr5g0238 321 MobiDBLite consensus disorder prediction 1 84 - -
Apr5g0238 321 MobiDBLite consensus disorder prediction 279 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0238 Apr-Chr5 2147668 2151735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0238 K13344 - gmx:100775500 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2399 2 28650479 28653876 Apr5g0238 5 2147668 2151735 PCT