Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0235 ATGGCTAACCCTTCTGGGAATCATCAAGAGCAAACAACCCATGTTGCGTCGTCGTTTAATGGGAATTTGGCACCCGATACTTCAGCCACCGCTCTCGCCATGAAGCACAACCCTGGTGTATCCCTCGATTGGACCCTAGAAGAACAAGCTATTCTTGAAGAAGGACTCTCTCTGTTTGCGTCTGATACTAACCTCGTACGTTATGCAAAGATAGCACAAAATCTAGACAACAAGACAGTCCGTGATGTAGCCCTGAGAGTCAGGTGGATGAATAAAAAAGAAACTTGCAAGAGAAGGAAGGATGAACACAATTTGTCTAGGAAAAGTAAAGATAAAAAGGAAAAGGTTTCAGATCTGGCAGCAAGGTCATCCCACTTTGCTGCTCAACCCAGTGTTTCCCCGTATGCTCCGGCAGTGATGATGATGGACAACAATGATGGCATCCCTCACGAAGCGATTGGAGGCCCTGCCGGTGAGCTATTGGAGCAAAATTCACAGGCCTTGAATCAAATCTCTACTAATCTTGCTGCTCTCCAGTTTCAGAATAACATCAAACTTTTCAGTCAAACGAGAGACAACATCCTCAAAATTTTGAACGACTTGAATGAGGTGCCAGAGGTAATGAGGCAAATGCCACCTCTTCCTTTTAAGATCAATGAAACGATATTGAGCTCCATACTTCCAAAAACAATTTACCAGATGCAATAA 708 0.4393 MANPSGNHQEQTTHVASSFNGNLAPDTSATALAMKHNPGVSLDWTLEEQAILEEGLSLFASDTNLVRYAKIAQNLDNKTVRDVALRVRWMNKKETCKRRKDEHNLSRKSKDKKEKVSDLAARSSHFAAQPSVSPYAPAVMMMDNNDGIPHEAIGGPAGELLEQNSQALNQISTNLAALQFQNNIKLFSQTRDNILKILNDLNEVPEVMRQMPPLPFKINETILSSILPKTIYQMQ* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0235 235 MobiDBLite consensus disorder prediction 98 120 - -
Apr5g0235 235 CDD SANT 44 93 IPR001005 -
Apr5g0235 235 Pfam Protein of unknown function (DUF3755) 178 210 IPR022228 -
Apr5g0235 235 MobiDBLite consensus disorder prediction 98 123 - -
Apr5g0235 235 MobiDBLite consensus disorder prediction 1 22 - -
Apr5g0235 235 PANTHER BNAC03G35350D PROTEIN 19 233 - -
Apr5g0235 235 Gene3D - 40 99 - -
Apr5g0235 235 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 19 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0235 Apr-Chr5 2120448 2124805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0235 - - gmx:100775443 365.54