Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0232 ATGGCAAATCTTGTTCCTGGGGTCCTTCTAAAGCTTATGCAGCACATGAACACAGATGTAAAAGTTGCTGGTGAGCACAGGTCCTCTCTGTTGCAAGTAGTGAGCATTGTTCCAGCACTTGCAGGGGGGGAACTGTTCCCAAATCAAGGCTTTTATCTCAAGGTTTCTGATTCCTTACATGCCACCTACGTTTCTCTCCCTGACGAGCATGATGATCTCATCCTCAGTGACAAGATTCAACTGGGTCAGTTTGTTTTTGTTGATCGTTTGGAAGCAGCTTCACCAGTTCCTATTCTTCATGGGGTTAGGCCTGTTCCTGGGAGACATGCTTGTGTTGGAACCCCTGAGGACATTGTTGCAACTCACTCACTTGGCTTCCTTAGTAATGATAACATTCACAAGAAAAGTGTTGGTTCTGGTTCCTTGGACTTAGAGAGGTCTAAGTCTCCTAGGAAAGTGTTGGGAAATCACCATGTTGGGGAGAAGGAGAAGAAGGACAAAGTAAGATTGAATGGTGGTGGTACTTATGAAGAGCATTTAGACAAGAAACCAGTGTTTTTGGCTAAAAGCAAATCTCAGACAACAAAAGCAGCAGCCAATGTTGTTGATGTGAAGAAGGAACCATTGGCAAGATTGAAGTCCTTGAATTCACGGTCCATTCCTTCTTCTCCTACTAGTTGCTATTCATTGCCTACTTCTTTTGAGAAATTTACCAATGGAGTCAAACAACAGGCAAATATCAAGGGAGTGGAGAAACTAACTGCTAAGGTGGGAGTGGTGGAGATAGGAAAGGGTGTTCGCGGCGTAAGTCCCCCTGGGAAGAGAATTTCTGTGGGAAATCCAATCAGAAATTTGGTTCATGGATTTGAGCTTGGTGCTAAGGCTCTGCGTAAGAGTTGGGAAGGGAATATGGAAGTCAAGAATAAAGACACATCCAAATTAAGGGCAGCCAAGTGTGATCCTAAGCCTGAGACTCCTAGGAGAAGTACTTCAAATGAAAAGTTGCCCTCTAAAGAGGAAAGCAAGGCAAAAACGCCAACGAAGTCCTCTAAGGAAGAGCACAGGACTCTTGCATCTACAAAGAAAGTTACTGCTGAAGGAACTATGGAGGAGCAAGAAATGTCAAGTAAGCAAAGAATTTCTGTTGGAAAGAAATCATCAGAAGTTTCTAAAACTGGACTCCCCGGAAACTGGCTCAAAATTTCTCCAAATAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTCCCATCATCAATTGCAAAGCTTGGGAGGGAAGTAATGAAGCACAGAGATGCAGCACAGTTGGCAGCAACTGAGGCTATACAAGAGGCTGCCGCTGCTGAGAGTTTGTTGCAATGTCTAAGTGTATACGCGGAGCTAAGTAATTCTGCCAAGGAACATCACCCGCAGCCAGCAATAGAGCAATTTTTATCTCTCCATAGCAGCCTAAATAATGGGCGGACAATTGCTGACTCCCTATCTAAATCCATTCCAGATGGTTCATCTCCAGATAGTGAAAGATGCATAACAGAAGCAGCACTAAAAATCAAAACAGATAGACATAAACTTGCAGCTTCGTGGGTCCAGGCTGCTTTATCCACCAACCTATCATCCTTTTCGGTCTATAACCGAGAACCTCTATCAACCAGGCTTCAAGTTTCATCAAATTCTCAAAATCAAAAGAATATCTTGAAAAACAAGCCAATACTAGTCCTAGAAAATTCAAGGGAAGATGCTCCATCAAAATCTCATGGAAAAACACGTCATTCCAAACTTGGCTCACAAGGAACTCCTCGCAAATCAAGTGACATGTTAGCAAATGGACACAAACAACTAGTCCAACCACCAGTGCCATGGGCTAGAGGAAATGGCCTTGATGAGGTGGTTAATTTGGCCGAGATGCTGCAGTTGCGGTCACGAGACTGGTTTTTGGTGTTTGTTGAGAGATTCCTGGACACTGATGGGGACACTGGCTTGTCAAACAATGGCCAGATAGCAGGTATGCTCTCTCAACTAAAAAGTGTAAATGATTGGTTGGATGAGATAGGGTCAAGCAAGAATGAGGGAGAATCATGCCAGATACCGGCTGAGACGATTGATCGGCTGAGGAAGAAGATATATGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTGAGTGGTGGATCACAATCATCACCTCAGATCCAAACAGCAGAGATCAAAGGCAAGAAATGA 2232 0.4377 MANLVPGVLLKLMQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSLHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHACVGTPEDIVATHSLGFLSNDNIHKKSVGSGSLDLERSKSPRKVLGNHHVGEKEKKDKVRLNGGGTYEEHLDKKPVFLAKSKSQTTKAAANVVDVKKEPLARLKSLNSRSIPSSPTSCYSLPTSFEKFTNGVKQQANIKGVEKLTAKVGVVEIGKGVRGVSPPGKRISVGNPIRNLVHGFELGAKALRKSWEGNMEVKNKDTSKLRAAKCDPKPETPRRSTSNEKLPSKEESKAKTPTKSSKEEHRTLASTKKVTAEGTMEEQEMSSKQRISVGKKSSEVSKTGLPGNWLKISPNSRKVTDASVQWASLPSSIAKLGREVMKHRDAAQLAATEAIQEAAAAESLLQCLSVYAELSNSAKEHHPQPAIEQFLSLHSSLNNGRTIADSLSKSIPDGSSPDSERCITEAALKIKTDRHKLAASWVQAALSTNLSSFSVYNREPLSTRLQVSSNSQNQKNILKNKPILVLENSREDAPSKSHGKTRHSKLGSQGTPRKSSDMLANGHKQLVQPPVPWARGNGLDEVVNLAEMLQLRSRDWFLVFVERFLDTDGDTGLSNNGQIAGMLSQLKSVNDWLDEIGSSKNEGESCQIPAETIDRLRKKIYEYLLTHVESAAAALSGGSQSSPQIQTAEIKGKK* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0232 743 Coils Coil 742 743 - -
Apr5g0232 743 PANTHER DUF936 FAMILY PROTEIN 1 742 - -
Apr5g0232 743 MobiDBLite consensus disorder prediction 304 393 - -
Apr5g0232 743 MobiDBLite consensus disorder prediction 361 393 - -
Apr5g0232 743 Pfam Plant protein of unknown function (DUF936) 4 724 IPR010341 -
Apr5g0232 743 MobiDBLite consensus disorder prediction 304 360 - -
Apr5g0232 743 PANTHER EXPRESSED PROTEIN 1 742 IPR010341 -
Apr5g0232 743 MobiDBLite consensus disorder prediction 567 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0232 Apr-Chr5 2100103 2104874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0232 - - gmx:100775984 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2390 2 28582943 28588050 Apr5g0232 5 2100103 2104874 PCT