Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0227 ATGGGGTTAGAATCGGTGGGAGATTTAGCGATTAACGTCATTCTGAAAAAATTAGGAGCCGAAGACATTGGCAGAGTGGGGTGTGTGAGTAAGAGATTTAGGTCTTCCGCTTCCGATGACACTCTTTGGATCAATCTCTGCTCCAATGAACTCGCTCTGTCTCAACCTCTCGACCATCATGGAAACCCTCTTCCTTCCTTCAAGGCAGCATATCAAGCATGGAGAGAAGCTTTTGTTATGTATCCTTGGCCTCTTGTTAAGCGTGTAAAAAGGTGCTGGGACAGAATAAAAACCTGGCTGACTAATAATTTTCCAGAAGCTAGGGCCACTCTTTGTAAAGGTGCAACAGAAGCTGAGATTGAGGAGTTGGAGAACGTCTTAAAAGTGAAATTGCCTCTTTCAACAAGGATCCTTTATCGCTTTCATAATGGGCAAGAAATTGCAAAAGCAGATCCTGCATCTAATACACTTGGCAGTTCCTTGGGTCTAATTGGGGGCTACTGCTTCTATGATTATTTGGTAAATGTTTATCTATTACCTATAAGTCAGGTAATCCGAGAAACTCAGCAAATTAGGCGTCGCTTAGGCTTTGTAAGAAGATCCAAGTATGTCCTTGTGGCTGCTTCATCCACATACAGTTTAAAGTTGTTTTTCCTCAACTGCACCAATGGTCAACTATATGTTGGAACCAGGAATCTTCTTACTGATAGAGACATAATCCCTTGTGTACCTCATGATTTGATTAGCTTATGTCATGAGTTAAATAGTGAACAGCAACAAGATGCCATGCTACTGTGGTTAGAAGAACACGGTCGCCGTTTAGAACATGGCTTTATCAAACTTCATGACGAAGGAAATGGCAGAGCCATTAATCTTTTCCCAGATGAACCACCTCATTGTTCAACAGCTGTAACTAATGGCGTGAAGGTTCGCGCTTCTGCGTTGGTTATCCCTGAGTTGATTGATCTGCATAAAGACCTTGAAAAGTACATGTTTGCATATTCAATTCGCTTGTCCCTTGAACCTCAAGGATGCATCATCAATGGATTGTCCTACAGCTCTTGCCAGCTTTATTGGAGGCGCTGGATCATCTGTGCCAATGATAATGTAGTATCTGATGTCAATGGAGAAGCTGTTATAGGACAGTTTCCACTTTTGCGTCCAGGTGCCAAAGAATTTGTTTATCAGAGTTGCACGCATCTACCAACACCATCAGGTTCCATTGAAGGTTCTTTTACATTTATACCTGGCAGATTGGCAGACCCAAAAGGAGACCCTTTCCTAGCTACAGTTGCACTCTTCCCGCTCCAGCTGCCAGACTATATTTTCTGA 1332 0.4264 MGLESVGDLAINVILKKLGAEDIGRVGCVSKRFRSSASDDTLWINLCSNELALSQPLDHHGNPLPSFKAAYQAWREAFVMYPWPLVKRVKRCWDRIKTWLTNNFPEARATLCKGATEAEIEELENVLKVKLPLSTRILYRFHNGQEIAKADPASNTLGSSLGLIGGYCFYDYLVNVYLLPISQVIRETQQIRRRLGFVRRSKYVLVAASSTYSLKLFFLNCTNGQLYVGTRNLLTDRDIIPCVPHDLISLCHELNSEQQQDAMLLWLEEHGRRLEHGFIKLHDEGNGRAINLFPDEPPHCSTAVTNGVKVRASALVIPELIDLHKDLEKYMFAYSIRLSLEPQGCIINGLSYSSCQLYWRRWIICANDNVVSDVNGEAVIGQFPLLRPGAKEFVYQSCTHLPTPSGSIEGSFTFIPGRLADPKGDPFLATVALFPLQLPDYIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0227 443 Gene3D - 94 230 IPR037883 -
Apr5g0227 443 SUPERFAMILY F-box domain 13 78 IPR036047 GO:0005515
Apr5g0227 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Apr5g0227 443 SUPERFAMILY SMI1/KNR4-like 92 196 IPR037883 -
Apr5g0227 443 Pfam ApaG domain 325 415 IPR007474 -
Apr5g0227 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Apr5g0227 443 Pfam SMI1 / KNR4 family (SUKH-1) 114 171 IPR018958 -
Apr5g0227 443 Gene3D - 8 93 - -
Apr5g0227 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Apr5g0227 443 Gene3D ApaG domain 299 443 IPR036767 -
Apr5g0227 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0227 K10290 - gmx:100809876 774.622