Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0224 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCAGCCACGAGTTGCATCATAGGAATATGTAGTGCTATTTGGTTCTATATACAGAAGAAAAATATTGGGTATTCACATGTGGGTCTGAGTTATGAAACTGCTATAGAAGGGCATTATTGGAGGATAATTACCTCTGCATTTTCCCATATAAGTGTTATTCATCTTGTTTTTAATATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAGCTGGGTCACTTAGGTCTTGGTGTTGAGTACTACTTGCAGTACACACTTGTGTTGGTTGTTTTATCAGGGGTGTTGGTGCTGGCAATGTATCATTTGTTGATTCAAAGATTCAAGCTTGAGTATTTTCGTCGAGTGACGGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACGATTCTTTCTGTGAAGCAACCATCATCCAAGTTGGATCTCTTTGGATTTCTCTCGCTTCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCAATTATTGTTCCTCAGGCAAGTTTTCTTGGCCATTTATCGGGGATTGTTGTTGGTTATGCTATAGCATGGGGTTTGATTCATGGGATGACCAATTACTGGGCAGTTTCCTTGTTGGGTTGGATTGTGCTTGTCTTTGTTTTGAGTCTGAAGAGATCAGGTGCACTTGACCTAAACTTTCTTGAGATTGAATCTGTTACTGATCCTTCCTTACCGTCTGTACGGTTTTTGGCATCAGGCAATGGTAGAACCCTGCAGATGAGTGCATTGCCAAATGGAAATGTTGAAATTGTCTAA 816 0.4093 MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHYWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMTNYWAVSLLGWIVLVFVLSLKRSGALDLNFLEIESVTDPSLPSVRFLASGNGRTLQMSALPNGNVEIV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0224 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Apr5g0224 271 Gene3D - 10 199 IPR035952 -
Apr5g0224 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Apr5g0224 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Apr5g0224 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0224 Apr-Chr5 2040936 2042558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0224 - - gmx:100818954 515.383