Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0221 ATGGCAACTTCGTTATTCCGCAACATTCGGAGAGCTTCTTTTGTTCTCAGATTCTCGTATGCCACCTCGTTTTCGGTCTCTCCCAGGTCAGTTGGGAGGGCACAAATATCTCTGTGTTCCCCGTTCAGGCACTGTATCACGCTATCAAAGGAAGGTTCATGGTGGGGTTTGAGAAATTTGAGTTATGGCACAGTTAACCTTGTGATAACGGGAGGGAAGGCCAAGTTTGAGACTCATGAAGCTGATCCTCCAAAGAAAGACAAGTGGAAGAACAAGAAGAGGTTTAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAAAGCAGCAAACAGGAAAGACCCCCGTCGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAGATTTGCCAATGCAGAAGAGAGAATCAAGTACAAGATTGAAAATGCCAGGGTTAAGGAAGCATTGCTCATTGAAAGACTCAAACGATATGAAGTTCCTAAGGTTCAGGGTCCTGTTGTAAAACCTGATGCCTTGACGGGGGAGGAACGGTTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAATTGGTAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAAACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCAATTCAAGTAATTGGAGATGACACAATAATATTTTATCGTGGAAGGAACTATGTACAGCCCGAGGTTATGTCACCAACAGATACACTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGACTCTGTTAGGCGCTTCATTGCTATTGCTGAGAAAGAGTTAGAGCTATATCACAGGCACGTTGCACTTTATGGTGATCCAAACAACCGTAATCCCTTATCAATGCTGGAAGGCCCAAGTGGAAACTCCAGAGAAAAAGGGTATCATGATGATAAAAAACTTGATTTTAGAAGCAATTATTTTTCGTCCGAACTTTCAGAAACAGAAGCAGATTCCACAGAGATGGAGCTATCAGAAACTGAAGAGGGTTCTGAAGATGAAAACCTGTTGATGAATGAATCAGATTCTGAAGAGAACAACATGTTGGATTCCAATGATGATGAAGAAAGAGAGGTATATTTTAATAAAATGCAAGGTGAAAGTGTAAGCGCAGCCACAGGTTCGTCACCAATGTCTAAACATAGCCGCTACTATAATAATCATTATTTATTGTCATAA 1296 0.4113 MATSLFRNIRRASFVLRFSYATSFSVSPRSVGRAQISLCSPFRHCITLSKEGSWWGLRNLSYGTVNLVITGGKAKFETHEADPPKKDKWKNKKRFKMQRKREKEKRKAANRKDPRRLGVKGKKKKQRFANAEERIKYKIENARVKEALLIERLKRYEVPKVQGPVVKPDALTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPIQVIGDDTIIFYRGRNYVQPEVMSPTDTLSKKKALEKSKYEQSLDSVRRFIAIAEKELELYHRHVALYGDPNNRNPLSMLEGPSGNSREKGYHDDKKLDFRSNYFSSELSETEADSTEMELSETEEGSEDENLLMNESDSEENNMLDSNDDEEREVYFNKMQGESVSAATGSSPMSKHSRYYNNHYLLS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0221 431 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Apr5g0221 431 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Apr5g0221 431 SUPERFAMILY YhbY-like 171 265 IPR035920 -
Apr5g0221 431 MobiDBLite consensus disorder prediction 405 425 - -
Apr5g0221 431 MobiDBLite consensus disorder prediction 355 391 - -
Apr5g0221 431 Coils Coil 92 112 - -
Apr5g0221 431 MobiDBLite consensus disorder prediction 89 106 - -
Apr5g0221 431 Gene3D - 170 270 IPR035920 -
Apr5g0221 431 MobiDBLite consensus disorder prediction 77 126 - -
Apr5g0221 431 MobiDBLite consensus disorder prediction 313 336 - -
Apr5g0221 431 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 391 IPR040286 -
Apr5g0221 431 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Apr5g0221 431 MobiDBLite consensus disorder prediction 349 425 - -
Apr5g0221 431 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0221 Apr-Chr5 2021566 2025024 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0221 - - gmx:100796393 655.981