Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0213 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGCAACCTCTGTTGCATTTGTCCTGCTCTGCGGGCAAGCTCGAGACAACCAGTGAAACGTTACAAGAAGTTGCTAGCTGATATTTTCCCACGAAATCAGGAGGCTGAACCTAATGATAGAAAAATTGGAAAGCTATGTGACTACGCTTCCAAGAACCCACTGAGAATTCCCAAGATTACTGACAACTTGGAGCAAATATGTTACAAGGATTTGCGTCATGAGACCTTTGGTTCAGTGAAAGTTGTCTTGTGCATATACAGGAAATTCTTATCGTCATGTAAGGAGCAGATGCCGCTTTTTGCTGGTAGTTTGTTAGAGATCATTCGAACTCTTCTAGAACAAACCAGAACAGATGAAATCAGGATCTTAGGCTGCAATACTCTTTTTGATTTTATAGATTGCCAGACAGATGGTACATATATGTTCAACTTAGAGGGTTTTATTCCTAAACTATGTCAATTGGCTCAAGAAGTGGGAGAAGATGAACGAGTTCTGCGGCTACGTTCAGCTGGACTACAAGCTCTATCCTTTATGGTGCGTTTCATGGGTGAGCACTCACATCTTTCCATGGATTTGGATGAAATTGTATCAGTGACTTTGGAGAATTATGTGAGTCTCCAGTCTAACTCCAAACCTTCCATGGAAGATAAACTGTCCCTGGACCTGTTAGTACAGGGATTTCCCAAAGTAGAGGACCCTTTACCAGATATCACTAAGAAGGATCCTTTGTTGCTTAAAGTTGTGACTGGATCTGAGATGGACTCTATGTTGGATACTGCTAAAGATCCTACATATTGGTCAAAGGTTTGCTTGCATAATATGGTCAAATTGGCAAGGGAAGCTACAACTCTACGGCGTGTCCTTGAGCCGTTTTTTCATTATTTTGATACTGAAAACCAATGGTGTCCGGAAAAAGGAGTAGCTGGTCGTGTTTTGATGAGGTGCCTGCAAAATTCAGCTGAAGCTTCCAGCATTGGAAATGATGGGTATAAGTTGAATACTGAACTTCAATATGCCTTGGAACTGTGTATGTTACATCTTTCCAACAAGGTTGGGGATGTAGGACCCATTCTTGATTTGATGGCTGTGTTGTTAGAGAGTATCTCAACTACAACCATCATTGCAAGAACAACAATCTCTGCTGTTTATCAAACTGCAAAATTAATCACATCCATCCCGAACATATCATATCACAAGAAGGCTTTTCCTGATGCTTTGTTTCATCAATTGCTCTTGGCGATGGCTCATCCTGACCATGAAACACGAGTTGGGGCTCATAGTATCTTCTCTATAGTGCTTATGCCATCTCTGTTTTCTCCCCGGTTGGACCAGAAAACAAAGATGGTTCAGAAGGTACCCAGTGAAAGCTTCTCCATTCAACATGAGGGCTTTTTAGGAGCAGAACATATCAATGGAAAACCTGTGGAGGGAAAGGCAGCAGTTGGTAACAATGAGAAATATGCAGTTCATCCATATCATGGTTACAGCTTTTTTGGTGTTCTAACTGATGGAAAAGACGAGCTAAGTTCTTTTCGGTTAAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTATGGACAGCGGCCCTGCAAATTTTGAGGCAATGGCTCACACTTACAGCATTGCTTTATTGTTCACCCGATCTAAGACATCCAGTTACATGGCTTTAGTAAGATGTTTCCAACTAGCATTCTCCCTCATGAGCCTCGCTTTGGACCAAGAAGGAGGTTTACAACCATCTCGCAGGAGGTCTCTTTTTACCTTGGCATCATACATGCTAATATTCTCTGCCAGGGCAGGCAATTTCCCCGAGCTAATTCCAAAAGTCAAAGCATCCCTGACAGTGACAACTGTAGATCCATTTCTTGAGTTGGTCGATGATGTCAGGCTGCAGGCTGTTCAAATAGAATCAGAGAACATAATTTATGGATCTCAGGAAGATGATGTTTCTGCTATGAAGTCACTTTCAGCAGTAAACTTGGATGACAACCAGTTGAAAGAAACTGTAATATCATTCTTCTTGACTAAATTTTCAAAATTATCGGAGGATGAGTTGTCAAGCATAAAGAATCAACTCGTACAAGGGTTTTCCCCTGATGATGCATATCCATTGGGACCTCCATTGTTTTTGGAGACACCACGGCCATGTTCTCCACTTGCTCAAATTGAGTTCCCAGATTTTGACGAGATTGTGGCTCCAGTGGCTTTGGTGGATGAAGAGACCAGGCCTGAACCAAGTGGAAGTCAGTCAGATCGTAAATCATCACTATCTATCAATTGCCCAGACATTCTAAGTGTTTATCAACTCTTAGAATCGGTTTTGGAAACCGCACGGCAAGTGGCAAGTTTCCCTATTTCCTCAACTCCTGTACCTTATGACCAAATGAAGAACCAGTGCGAGGCACTTGTTACTGGGAAACAGCAGAAGATGTCAGTTCTTCAGAGTTTCAAGTACCAGCAGGATACTAGGGCAATAGTTCTTTCAAGTGAAAATGAAATGAAAGTTTCCCCACTACCAATTAAGACACTCGAGTATTCAGAAGATGATCTGAAGTTAGTGAGTCAGGAGCAATTTCAAGCGCAGTATCAAGTTCGCCTCTGTTCATATGACTTTGGACTTCAACATTCTTTGAAACTACCACCTTCTAGCCCCTATGATAAATTCTTAAAAGCTGCTGGATGCTAA 2742 0.422 MGVMSRRVVPVCGNLCCICPALRASSRQPVKRYKKLLADIFPRNQEAEPNDRKIGKLCDYASKNPLRIPKITDNLEQICYKDLRHETFGSVKVVLCIYRKFLSSCKEQMPLFAGSLLEIIRTLLEQTRTDEIRILGCNTLFDFIDCQTDGTYMFNLEGFIPKLCQLAQEVGEDERVLRLRSAGLQALSFMVRFMGEHSHLSMDLDEIVSVTLENYVSLQSNSKPSMEDKLSLDLLVQGFPKVEDPLPDITKKDPLLLKVVTGSEMDSMLDTAKDPTYWSKVCLHNMVKLAREATTLRRVLEPFFHYFDTENQWCPEKGVAGRVLMRCLQNSAEASSIGNDGYKLNTELQYALELCMLHLSNKVGDVGPILDLMAVLLESISTTTIIARTTISAVYQTAKLITSIPNISYHKKAFPDALFHQLLLAMAHPDHETRVGAHSIFSIVLMPSLFSPRLDQKTKMVQKVPSESFSIQHEGFLGAEHINGKPVEGKAAVGNNEKYAVHPYHGYSFFGVLTDGKDELSSFRLSSHQVSLLLSSIWVQATSMDSGPANFEAMAHTYSIALLFTRSKTSSYMALVRCFQLAFSLMSLALDQEGGLQPSRRRSLFTLASYMLIFSARAGNFPELIPKVKASLTVTTVDPFLELVDDVRLQAVQIESENIIYGSQEDDVSAMKSLSAVNLDDNQLKETVISFFLTKFSKLSEDELSSIKNQLVQGFSPDDAYPLGPPLFLETPRPCSPLAQIEFPDFDEIVAPVALVDEETRPEPSGSQSDRKSSLSINCPDILSVYQLLESVLETARQVASFPISSTPVPYDQMKNQCEALVTGKQQKMSVLQSFKYQQDTRAIVLSSENEMKVSPLPIKTLEYSEDDLKLVSQEQFQAQYQVRLCSYDFGLQHSLKLPPSSPYDKFLKAAGC* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0213 913 SUPERFAMILY ARM repeat 60 615 IPR016024 -
Apr5g0213 913 PANTHER PUTATIVE, EXPRESSED-RELATED 324 913 - -
Apr5g0213 913 PANTHER PUTATIVE, EXPRESSED-RELATED 1 325 - -
Apr5g0213 913 PANTHER CYCLIN-LIKE PROTEIN 1 325 - -
Apr5g0213 913 PANTHER CYCLIN-LIKE PROTEIN 324 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0213 Apr-Chr5 1938043 1948034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0213 K21842 - gmx:100811354 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2374 2 28490030 28499245 Apr5g0213 5 1938043 1948034 PCT