Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0204 ATGATGGCCTTGAGTTTCAACATGTTTCCGCTGTTTTTCGTTTTCTCTCATTTTGTGACCTTGTCCATCGCCGTTACTCATTCCCAGGTTGTCGTTTCGTATCTCAACCGAAGCAGTTTCCCGCAGGGCTTTATTTTCGGGACAGCATCCTCAGCATACCAGTATGAAGGTGCTGCTAGGGAAGGTGGAAGAGGACCAAGTATATGGGATACCTTCACTCATAAGTACCCTGAAAAAATAAAAGATGGAGGTAATGGAGATATAGCCGACGACTCATATCATCGGTATAAGAACATGAATTTGGATGCTTATAGATTCTCCGTTTCTTGGTCTCGAGTTCTACCAAAAGGAAAGCTTAGTGCAGGTGTAAACCATGAAGGAATAAAGTATTACAACAACCTTATCAACGAGTTAATGGCTAATGGTCTGCAACCATATGTGACCATTTTTCATTGGGATGTTCCCCAAGCCTTAGAGGATGAGTATGGCGGTTTTTTAAGCCCTCACATTGTAGATGATTTTAGAGACTACGCTGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAAACATTGGATTACTTTGAATGAACCAAGGAGTGTGAGCAAGAATGGCTACGCAAATGGCAGGTTTGCACCAGGTCGATGTTCTGATTGGTTAAAACGGAATTGCACAGGCGGTGATTCAGGAACAGAACCATATTTGACTTCTCATTATCAGCTTCTTGCTCATGCTGCTGCTGCCAAACTGTATAAGACCAAGTACCAGGCATCTCAAAACGGTTTAATTGGGATTACCTTGAATTCTGACTGGTATGTGCCAATCTCTGAAAAGAAATCAGATTATGATGCTGCACGACGAGGCCTTGACTTCATGTTTGGATGGTACATGGATCCGCTCACAAAAGGTGAGTATCCCAAAAGCATGCAATCTCTGGTGGGAAACCGGTTACCAAAGTTCTCCAAAGAAGAAGCCAAGCAACTTAAGGGGTCGTTTGATTTTCTGGGCCTAAACTACTACTCATCCTCATATGCTGCCTATGCACCTCATCAACATGGTGCTAGACCAGCCCTACAAACTGATGGTCTTGTGAATTTTACAAATCAGCATGATGGCAAGCCCCTTGGTCCAATGGCTGCTTCTGATTGGTTATGCATTTATCCACGAGGATTTCGACAACTATTGCTTTTCATCAAGAAGTATTACAACAACCCCGTAATTTACATTACTGAAAATGGTTATGATGAATACAGCGATCCAACACTATCACTTGAAGAAAGCCTTATAGATACTTACAGGGTTGATTACTTATATCGTCATCTTTATTATCTTGAAACTGCAATCAAGGATGGTGTGAATGTGAAGGGATATTTTGTATGGTCGTTGCTGGATAACTTGGAATGGGACTCAGGCTATACCGTGCGATTCGGATTGGTCTTTGTGGATTTCAAAGATGGCTTGAAAAGATATCCCAAACTCTCCGCACATTGGTTCAAAAACTTTCTCAGTAAATCATAA 1518 0.4183 MMALSFNMFPLFFVFSHFVTLSIAVTHSQVVVSYLNRSSFPQGFIFGTASSAYQYEGAAREGGRGPSIWDTFTHKYPEKIKDGGNGDIADDSYHRYKNMNLDAYRFSVSWSRVLPKGKLSAGVNHEGIKYYNNLINELMANGLQPYVTIFHWDVPQALEDEYGGFLSPHIVDDFRDYAELCFKEFGDRVKHWITLNEPRSVSKNGYANGRFAPGRCSDWLKRNCTGGDSGTEPYLTSHYQLLAHAAAAKLYKTKYQASQNGLIGITLNSDWYVPISEKKSDYDAARRGLDFMFGWYMDPLTKGEYPKSMQSLVGNRLPKFSKEEAKQLKGSFDFLGLNYYSSSYAAYAPHQHGARPALQTDGLVNFTNQHDGKPLGPMAASDWLCIYPRGFRQLLLFIKKYYNNPVIYITENGYDEYSDPTLSLEESLIDTYRVDYLYRHLYYLETAIKDGVNVKGYFVWSLLDNLEWDSGYTVRFGLVFVDFKDGLKRYPKLSAHWFKNFLSKS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0204 505 Pfam Glycosyl hydrolase family 1 38 504 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 SUPERFAMILY (Trans)glycosidases 31 503 IPR017853 -
Apr5g0204 505 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 44 58 IPR033132 -
Apr5g0204 505 PANTHER GLYCOSYL HYDROLASE 30 504 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 PRINTS Glycosyl hydrolase family 1 signature 331 345 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 PRINTS Glycosyl hydrolase family 1 signature 407 415 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 PRINTS Glycosyl hydrolase family 1 signature 430 441 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 PRINTS Glycosyl hydrolase family 1 signature 451 468 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 PRINTS Glycosyl hydrolase family 1 signature 475 487 IPR001360 GO:0004553|GO:0005975
Apr5g0204 505 Gene3D Glycosidases 20 504 - -
Apr5g0204 505 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 30 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0204 Apr-Chr5 1850432 1855264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0204 11 504 Glycoside Hydrolase AT5G44640 54.582 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0204 - K01188 gmx:100801874 924.465