Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0203 ATGGCTATGGCATTCATTGGCTACCTATATCTCTTCCACTTTGCTGTCTTCTTCACTCTTGTCATTTGCACCTCCTTTACAATCACTGAAGCTGTTGCTCCTGTTCTTGATGTTTCTTCTCTAAATCGCACCAGCTTTCCGCCAGGTTTCATCTTTGGAACTGCCTCCTCTTCCTACCAGTATGAAGGTGCTGCAAATCAAGGTGGCAGAGGACCAAGTATATGGGATACCTTAACTCATAAACATCCAGAAATAATATCCGATAGGAGCAATGGAGATGTAGCTGTTGATCAGTATCATCGCTATAAGGAAGATGTTGGGATCATGAAGTATATGAATACAGATGCTTACAGATTCTCCATCTCTTGGTCAAGGATATTGCCAAAAGGAAAAATAAGCGGGGGTATAAACCAAGAAGGAATCAAATATTACAACAACCTCATCAACGAGCTACTGGCTAATGGTCTTCTCCCATTTGTGACGCTTTTCCATTGGGATCTTCCACAAGCCTTAAAAGACGAGTATGGTGGCTTCTTAAACCCTCATATTATCAATGATTTCCAAGATTATGCAGAGCTATGCTTCAAGGAATTTGGAGATAGAGTGAAACATTGGATTACTTTAAATGAGCCATGGAGTTTTAGTATGGGCTCAGAGCCCTACCTGACCTCACACTACCAACTACTTGCTCATGCAGCTGCTGTCAAGATTTATAAAACAAATTATCAGGCATCACAAGATGGTTTCATAGGCATCTCATTAAATTGTCACTGGTTCATACCATTTTCAAATGATACATTAGATCGTCAAGCTGCCCAACGAGCTCTTGATTTCATGTTTGGATGGTTTATGGAACCACTAACCACAGGAAACTATCCAAAAACCATGAAGTCTTTACTGGGAAGCAAATTACCAAACTTCACTAAAGAGCAAGCCAAGCTACTTATTGGCTCGTTTGATTTTATTGGACTAAATTACTACACCACTAATTATGCTGCCAATATACCCAATCCAATTAATAACACAAGCAGTCCTAACTATTACCAAGATACTCGTGTTAATTTTACAACTGAACGTAATGGGACACCCATTGGACCAAGGGCTGCTTCGTCTTGGCTATATGTTTATCCAAGGGGACTTCGAGAATTATTGTTGTACACAAAGATGAAGTATAACAATCCTGCAATTTACATAACAGAAAATGGTATGGACGAGTTCAATGATCCAACACTATCACTTGAAGAGGCCCTCATGGATACTTATAGAATTGATTACTTCTATCGCCATCTTTATTATATTTCAATTGCAATCAAGGATGGGGTGAATGTACAGGGATATTTTGCATGGTCACTTTTGGACAACTTTGAATGGAGTGCTGGCTACACCTTGCGTTTTGGAATTAACTTCGTCGATTACCAAGATAATTTGACAAGACACCAAAAGCTCTCTGCTCATTGGTTTAGGAATTTTCTTCAGAAATAA 1482 0.3927 MAMAFIGYLYLFHFAVFFTLVICTSFTITEAVAPVLDVSSLNRTSFPPGFIFGTASSSYQYEGAANQGGRGPSIWDTLTHKHPEIISDRSNGDVAVDQYHRYKEDVGIMKYMNTDAYRFSISWSRILPKGKISGGINQEGIKYYNNLINELLANGLLPFVTLFHWDLPQALKDEYGGFLNPHIINDFQDYAELCFKEFGDRVKHWITLNEPWSFSMGSEPYLTSHYQLLAHAAAVKIYKTNYQASQDGFIGISLNCHWFIPFSNDTLDRQAAQRALDFMFGWFMEPLTTGNYPKTMKSLLGSKLPNFTKEQAKLLIGSFDFIGLNYYTTNYAANIPNPINNTSSPNYYQDTRVNFTTERNGTPIGPRAASSWLYVYPRGLRELLLYTKMKYNNPAIYITENGMDEFNDPTLSLEEALMDTYRIDYFYRHLYYISIAIKDGVNVQGYFAWSLLDNFEWSAGYTLRFGINFVDYQDNLTRHQKLSAHWFRNFLQK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0203 493 Gene3D Glycosidases 26 493 - -
Apr5g0203 493 Pfam Glycosyl hydrolase family 1 44 492 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 PRINTS Glycosyl hydrolase family 1 signature 318 332 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 PRINTS Glycosyl hydrolase family 1 signature 396 404 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 PRINTS Glycosyl hydrolase family 1 signature 419 430 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 PRINTS Glycosyl hydrolase family 1 signature 440 457 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 PRINTS Glycosyl hydrolase family 1 signature 464 476 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 50 64 IPR033132 -
Apr5g0203 493 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 15 493 - -
Apr5g0203 493 PANTHER GLYCOSYL HYDROLASE 15 493 IPR001360 GO:0004553|GO:0005975
Apr5g0203 493 SUPERFAMILY (Trans)glycosidases 33 492 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0203 Apr-Chr5 1838016 1842540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0203 16 493 Glycoside Hydrolase AT5G44640 49.307 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0203 - K01188 gmx:100785608 879.396