Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0194 ATGGATAAATACTTGGTTTCGCAGAAGCCCTCAATTGAAAGGGTTGAACCTTTTCGCAGATGGCGTTGGAAAAGGAGCTCGGTGGAGCTAAATGGTAGATTTGAGCCTAACTATCGTCATGAGATGCTGGATTTGCTAATTCGTTCCTATTCGGAGGTTGGAGCCTTTCCGCACTTGTATCAAGTGGATGGATCGCCGTGCCAATCTCATATGAATCGACTTGTTAGTGAGGCTAATGGTGATCGTCATCTTCCATATAGAAAGCAAGGCATCGCTGCAGTAGATTTTGACAACAAGGGAATATACTTGGTGTCTGTGACAAAAGCAGGTTGCTTAACAGTGCATGATTTTGAAGCTCTTTATTGCCAGATACATGAATTAACTTGCTTGAAAGAAGATGAAAGCAAGCATTTAATGCACCTCTCACTAAATCAACAACTTGATGCTGTCAGATGGAATCCTGTTAATCAGAATGAGGTTGTCTGTGCATCTGTGAAAAGTAATGAACTACTCATATTTGATGTTGGATATGTCTCATCAGAACCAGTTGAAGTGTTAAGAACAAGACATACAACCACAGTTCATGGGTCCAGCATACACAAAGGTCTCTCTGATGTTGCTTTTACATCAAATGACACAAGGATACTTGCTTCTGATACACATGGTGTGATTAATATCTGGGATAGAAGAGTGAATGCTCTACCTTGCCTTGAGCTTGCATCTGCTTCATGTGATACCATTAATAGAATCCAATTAAATGCTGATAATCAGATTATTTTTGGTGCAGGGAAGCATGGGCTCATGTATATGTGGGATATTCGTGGTGGAAGAGCTTCTGCCACTTTTCAAAGTCACAAAGAGATATGCCATCCACCTGTAACATCAGTGAAGTTAGCAACATTGCTAGAGAAGATTGGATCTTTGAAGGCACAAACAGATATAGTTCCCAAGGAGATTCACTCTATTGATATTAATACATCATGCCCGTATCAGTTAGCATTCCATCTTGACGATGGCTGGTCAGGCGTTTTGGATATTAATAATTTTCAAGTTACACATATTCATTGCCCACCCCCAGCTTGGTTAAATGAGTCATATATTCCCGCTGATCTATCATATTTAAGAAAACCTTCATGGTTATCGACGTGTTCGGTCTATTTGGTTGCATCATCATCTGATTATGGCATTCATCTCTTGGATTTCTATCCTAGCACCAGTTCACCGAGCCATGTAGATTACAAGGAGGATATACAAGAAATTTCAAGGCGCAACAACCAAAGTAATCAAAATCGGTTTATTTATTTATCGGAAGGAGTTATCTCATGTGCTGCTCACCCTTTATATAATGCCATTGTTGCTGGAACAAAGAAATCTTCTTTGCTTGTGGTTTCCCAACGACATGAGTCATGCAGAAGTGAAGATTAG 1425 0.4 MDKYLVSQKPSIERVEPFRRWRWKRSSVELNGRFEPNYRHEMLDLLIRSYSEVGAFPHLYQVDGSPCQSHMNRLVSEANGDRHLPYRKQGIAAVDFDNKGIYLVSVTKAGCLTVHDFEALYCQIHELTCLKEDESKHLMHLSLNQQLDAVRWNPVNQNEVVCASVKSNELLIFDVGYVSSEPVEVLRTRHTTTVHGSSIHKGLSDVAFTSNDTRILASDTHGVINIWDRRVNALPCLELASASCDTINRIQLNADNQIIFGAGKHGLMYMWDIRGGRASATFQSHKEICHPPVTSVKLATLLEKIGSLKAQTDIVPKEIHSIDINTSCPYQLAFHLDDGWSGVLDINNFQVTHIHCPPPAWLNESYIPADLSYLRKPSWLSTCSVYLVASSSDYGIHLLDFYPSTSSPSHVDYKEDIQEISRRNNQSNQNRFIYLSEGVISCAAHPLYNAIVAGTKKSSLLVVSQRHESCRSED* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0194 474 SUPERFAMILY WD40 repeat-like 85 400 IPR036322 GO:0005515
Apr5g0194 474 Coils Coil 410 430 - -
Apr5g0194 474 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 474 - -
Apr5g0194 474 SMART WD40_4 179 228 IPR001680 GO:0005515
Apr5g0194 474 SMART WD40_4 232 272 IPR001680 GO:0005515
Apr5g0194 474 SMART WD40_4 71 116 IPR001680 GO:0005515
Apr5g0194 474 Gene3D - 58 471 IPR015943 GO:0005515
Apr5g0194 474 PANTHER WD40 REPEAT PROTEIN 12, 37 1 474 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0194 - - gmx:100780441 850.892