Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0179 ATGGCACGCGCTCTAACCCCTATCTCTTACACTCTCACTAAAACCCTAAACCCCATTTTTCCATTTCACCACACCCTTCCCGTCTCCCATTCAATCCTTTGTTCGGTTTCTCACCCGAAGCTCACCTCATTCCCTTACCGGAGCCTGTCACGCTCCGTCATCCGGTTTAGCGCCGGCGAATTCTCTGGCAGTGTCGACGATGAAGAAGGATCGGAGGAATTGGAGGACCTTGATGTCATCGCGCTCGAGCAAGAAGCAAAGGACACAGTCCTAGCCTATGCAAGCTCTCTGTCTCAAATTCTGAGTCTTGAAGATGGGGAGAAAAATGGTCGCAAGGAAACAGCTCAAACCCGCAGGAGGAGTGCGCGTAGAACAAAAAATATTCCTGACAATCTTCTCCCGAGGGTTGCAATTGTTGGAAGGCCAAATGTTGGCAAATCAGCGCTATTTAATCGTCTTGTTGGGGGAAACCGGGCAATTGTGGTGGATGAACCTGGGGTTACCAGGGATCGTTTATATGGTCGATCATATTGGGGAGAGAGTGAATTCATGGTAGTGGACACAGGGGGGGTTCTCACTGTTTCAAAATCACAAGATAATGTTATGGAAGAGCTAGCTATTACTACTACCGTTGGTATGGATGGTATTCCACTTGCCGCTAGAGAGGCAGCTGTTGCCAGGATGCCCTCAATGATTGAGAGACAAGCAACTGCAGCTATGGAAGAATCATCTGTTATTATTTTCCTGGTTGATGGTCAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGACTGGCTACGTAAAAACTACTCAGATAAATGTGTCCTTCTTGCAGTTAACAAGTGTGAATCTCCACGAAAAAGAATTATGCAGGTGTCTGAATTTTGGTCCCTTGGATTTGAACCACTTCCAATATCAGCTATCTCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGCTACAGAAAATTGAGGAACCGAATGATCTTGATGAAGAAGAAGATTATGTTCCTGCAATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGCACTACTCGTGATGCTATTGATACTGAATTTACTGGACCAGATGGCCAGAAGTTCCACCTTATTGATACTGCCGGAATCAGGAAAAGAGCAGCCATAGCTTCAGCTGGGAGTACAACAGAGGCTTTGTCAGTGAATCGAGCATTTCGTGCTATTCGCTGTTCTGATGTTGTAGCTCTTGTCATTGAGGCCATGGCCTGTATCACAGAACAGGACTACAAGATAGCTGAAAGGATTGAAAAAGAAGGGAAAGGTTGTGTGATAGTTGTAAACAAGTGGGATACAATACCAAATAAAAACCAGCAGACTGCATCATACTATGAGCAAGATGTCAGGGAGAAGCTTCGTGCTCTTGACTGGGCTCCAATTGTTTATTCTACTGCTATAGCTGGTCATAGTGTTGACAAGATTATTGTGGCTGCTAGTGAAGTTGAAAAGGAGAGATCAAGAAGACTCGGCACTTCTATATTGAATCAAGTAGTGCAGGAAGCAGTAGCTTTCAAGCCTCCTCCCAGGACGCGTGGTCGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCACCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTCCTGAGACTTACCGGCGCTATATGGAGAAGCAACTGCGTTCAGATGCAGGTTTTTCTGGTACCCCCATTCGGCTTCTATGGCGCAGCAGAAGGAAAATAGGAAAAGATGAAGGCAAAGCTGTATCAAGGACCCAAGATAATCATACGTCAAATGATCGAAAATTGGTATCAACCACACCATAG 1914 0.454 MARALTPISYTLTKTLNPIFPFHHTLPVSHSILCSVSHPKLTSFPYRSLSRSVIRFSAGEFSGSVDDEEGSEELEDLDVIALEQEAKDTVLAYASSLSQILSLEDGEKNGRKETAQTRRRSARRTKNIPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGESEFMVVDTGGVLTVSKSQDNVMEELAITTTVGMDGIPLAAREAAVARMPSMIERQATAAMEESSVIIFLVDGQAGLTAADVEIADWLRKNYSDKCVLLAVNKCESPRKRIMQVSEFWSLGFEPLPISAISGTGTGELLDLVCSGLQKIEEPNDLDEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFHLIDTAGIRKRAAIASAGSTTEALSVNRAFRAIRCSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQDVREKLRALDWAPIVYSTAIAGHSVDKIIVAASEVEKERSRRLGTSILNQVVQEAVAFKPPPRTRGRKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRSDAGFSGTPIRLLWRSRRKIGKDEGKAVSRTQDNHTSNDRKLVSTTP* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0179 637 Gene3D - 524 608 IPR015946 -
Apr5g0179 637 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 524 605 IPR032859 -
Apr5g0179 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 611 IPR027417 -
Apr5g0179 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 327 IPR027417 -
Apr5g0179 637 Hamap GTPase Der [der]. 133 608 IPR016484 GO:0005525
Apr5g0179 637 Gene3D - 131 337 IPR027417 -
Apr5g0179 637 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 227 604 IPR016484 GO:0005525
Apr5g0179 637 PRINTS GTP1/OBG GTP-binding protein family signature 344 364 IPR006073 GO:0005525
Apr5g0179 637 PRINTS GTP1/OBG GTP-binding protein family signature 394 409 IPR006073 GO:0005525
Apr5g0179 637 MobiDBLite consensus disorder prediction 612 637 - -
Apr5g0179 637 CDD EngA2 344 517 - -
Apr5g0179 637 TIGRFAM small_GTP: small GTP-binding protein domain 342 491 IPR005225 GO:0005525
Apr5g0179 637 PANTHER GTP-BINDING PROTEIN 111 615 - -
Apr5g0179 637 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 342 522 IPR031166 GO:0005525
Apr5g0179 637 Gene3D - 338 522 IPR027417 -
Apr5g0179 637 MobiDBLite consensus disorder prediction 612 627 - -
Apr5g0179 637 Pfam 50S ribosome-binding GTPase 344 465 IPR006073 GO:0005525
Apr5g0179 637 Pfam 50S ribosome-binding GTPase 135 282 IPR006073 GO:0005525
Apr5g0179 637 CDD EngA1 137 325 - -
Apr5g0179 637 PANTHER GTPASE DER 111 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0179 Apr-Chr5 1614803 1620931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0179 - - gmx:100777588 1050.81