Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0173 ATGTCAATAGTGCCTGTGAACCAGGGTAACGGCAGTGGCTCAAACTCCTCTGTGGATTTTTGGGATCCAAATGGCATGGCTCTCTGGGATCCATTCATGGACTTTCCTCTCCCTCCTTCCCTTTCCAATTTCTTCCCTGATTTGGGATTCGGGTCATCTGTAAACACCCGTTTGGATTGGAGGGAGACAGCAAGAGCGCACGTGTGGAAAGTGGTGCTTCCTGGCTTCACCAACGAAGATGTGTTGGTTGAGCTTCAAGACGATAGAGTTCTTCAAGTCAGCGTGGAGAGTGGCAACTTCTTGAGCAAGTTTAAGATCCCTGACGATGGCAACATCCAACAGCTCAAAGCCAACATGAATCATGGGGTTCTCATTGTCACTGTTCCCAAGTTTGATCAACCCGCTGCCAATAGGAACATAAGGATTGTTGAAATTGATGGCACTGGCTGA 450 0.4822 MSIVPVNQGNGSGSNSSVDFWDPNGMALWDPFMDFPLPPSLSNFFPDLGFGSSVNTRLDWRETARAHVWKVVLPGFTNEDVLVELQDDRVLQVSVESGNFLSKFKIPDDGNIQQLKANMNHGVLIVTVPKFDQPAANRNIRIVEIDGTG* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0173 149 Gene3D - 17 145 IPR008978 -
Apr5g0173 149 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 148 - -
Apr5g0173 149 SUPERFAMILY HSP20-like chaperones 27 135 IPR008978 -
Apr5g0173 149 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 49 146 IPR002068 -
Apr5g0173 149 Pfam Hsp20/alpha crystallin family 59 145 IPR002068 -
Apr5g0173 149 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0173 Apr-Chr5 1558561 1560033 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0173 K13993 - gmx:100305751 194.512