Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0172 ATGGAAAATCAAAGGCACCGTTTGGTTCTAATACCGCCACCATTTCAAGGTCACTTAACTCCAATGCTTCAATTAGCCAACACCCTTCAATCAAAAGGGTTCTCCATCACTGTGGCACACGCCCATTTCAACTCCCCTGATCCTTCTAATCACCCTAACTTGCTTTTTCTACCTTTGTCCTATGGTTTATCCGACACACACATCTCCTCCAAGAATATTGTGGATATTTCCGCGACCTTAAATACCAAGTGTGTGTCTCCACTTAAAGAGTTTTTAGTTGATCAGATTGCAAAAGCAAATATAAGCCATGAAAAGATTGCTTGTGTTATCTATGATGGATTAATGCATTCCATTGATCTCGTGGCCAGAGAACTAAAACTACCCAGCATGGTCCTCAGAACCACCAGTGCTACTAATGTACTCACCTATTATCATGCGTTTGTTCATCTTCAACGCACCGGTTGCCTTCCCTTCCAAGATTCTAAGTCGTTGGAGTTGGTGCCAGAACTTGAACCGCTCCGATTCAAAGATCTACTAATTTTCAAATTGACAAACTCGGATGTTTTGCAGCAGCAATTAGTCAAAACACTTGCTGTGAGGCCTTCTTTGGGCTTTATATTCAACACTGTGGATTGCCTTGAAGAGCAATCCTTGTATCAGCTACGCCATGTGTACAAAGTAAGACTCTTTCCTATAGGCCCTTTACACATGATTGCTGAAGATTCATCTAGTAGTAGCTTTGTGGAAGAAGATTATAGCTGCATAGCATGGCTCAACAACCAAGCGAGAAAATCTGTGTTGTATGTAAGTTTGGGAAGCATAGCTAGCTGGGATGAGAAAGAGCTAACTGAAGTGGCTTGGGGCTTAGCCAATAGCAAACAAAATTTTCTTTGGGTTATTAGACCCGGGACCATTGATGATGTTTCAGAGTGGCTTCAATCATTGCCTGAAGATGTTACAGGAGCAATAGCAAAAAAGGGTTGCATAGTGAAATGGGCACCCCAAGGTGAAGTTTTGGCACACCAAGCTGTGGGAGGGTTTTGGAGCCATTGTGGATGGAATTCTACTTTGGAGAGTTTGAGTGAAGGAGTGCCAATTATTTGCCAACCTCATTTTGGGGATCAAGGGGTAAATGCTAGGTTGTTGAGCCATGTATGGAAGGTAGGTCTAGAATGGTCCAATATCATAGAAAGGGATGAAATAGAAAGTGCAGTGAGAAGACTTATGGAGGATTCAGAAGGGAAGGAGATGAGGCAGAGAGCATTAAAATTGAAGAATGAGATTAGGCTAGCCGTGCAAGGTGGTTCTTCCTATGATGCCTTGAATGGCTTGGTAAAGAGTATCCTATCAGTGAATCTCTGA 1362 0.4251 MENQRHRLVLIPPPFQGHLTPMLQLANTLQSKGFSITVAHAHFNSPDPSNHPNLLFLPLSYGLSDTHISSKNIVDISATLNTKCVSPLKEFLVDQIAKANISHEKIACVIYDGLMHSIDLVARELKLPSMVLRTTSATNVLTYYHAFVHLQRTGCLPFQDSKSLELVPELEPLRFKDLLIFKLTNSDVLQQQLVKTLAVRPSLGFIFNTVDCLEEQSLYQLRHVYKVRLFPIGPLHMIAEDSSSSSFVEEDYSCIAWLNNQARKSVLYVSLGSIASWDEKELTEVAWGLANSKQNFLWVIRPGTIDDVSEWLQSLPEDVTGAIAKKGCIVKWAPQGEVLAHQAVGGFWSHCGWNSTLESLSEGVPIICQPHFGDQGVNARLLSHVWKVGLEWSNIIERDEIESAVRRLMEDSEGKEMRQRALKLKNEIRLAVQGGSSYDALNGLVKSILSVNL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0172 453 Gene3D Glycogen Phosphorylase B; 252 431 - -
Apr5g0172 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 76 416 IPR002213 GO:0008194
Apr5g0172 453 CDD GT1_Gtf-like 7 445 IPR002213 GO:0008194
Apr5g0172 453 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 449 - -
Apr5g0172 453 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 4 449 - -
Apr5g0172 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 449 - -
Apr5g0172 453 Gene3D Glycogen Phosphorylase B; 8 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0172 Apr-Chr5 1554940 1556673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0172 6 445 Glycosyltransferase AT3G46670 43.820 3.52e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0172 - - gmx:100786860 710.679