Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0139 ATGGCGGTTCTGAGAGGTAGTTTGGGCAACATCTTTTCACATCGTAATCCTTTGTTTTTGAGCCTTTCACATCTCACTACTCACCCCAATTACCTCTTCCTCACTCCAATGCACTCTCTCACACTCTCTGCTTCTCTTTCCACTTCCCACAACCCTTCTTCACAAGAGTCTCACTCTCGCTGGAGACCCATGTGCTTGTATCACTCCCAGGGAAAGTGCACCAAGATGGATGATCCTATCCACCTTGAAAGGTTTAATCATGATTTCTCCAGGGAGCTTCAAGTGAATGCCCCTGAGTTAAACAAAATATGCGCTCAGAATTTAGACTTTTTCCTTGTGCTTGATTTAGAGGGTAGGGTTGAGATTCTTGAGTTTCCAGTTCTAATGATTAGTGCAAAAACAATGCAAGTTGAAGACATTTTCCACAGGTTTGTGAGGCCATCAAAAATGAGTGAACAAAGAATAACTGAATACATTGAAGGAAAGTACGGAAAATTTGGAGTTGACAGAGTTTGGCATGACACAGCAATACCATTCAAGGAAGTTATTCAACAATTTGAAGCTTGGTTGATGCAACATCAATTGTGGATGGGTGGAGAACTTAATCGTGCAGGATTTGTAACTTGTGGAAATTGGGATTTGAAAACAAAGGTCCCTCAGCAATGTGACGTGTCAAAGATAAAGCTTCCTCCATATTTTATGGAGTGGATTAATCTCAAAGATGTCTATCTAAACTTCTATAATAGGAGGCAGGCCACAGGAATGGTTACAATGATGAAGGAACTGCAAATCCCATTGGTGGGAAGTCATCATCTTGGTATTGATGATACAAAGAACATAGCAAGAGTTCTGCAGCACATGCTTGTTGATGGTGCACTCATTCAGATTACTGCAAGGAGGAATCCTAAGTCTCATGGAGATGTTAACTTTCTTTTCAAGAATCGTATTAGATAG 954 0.4078 MAVLRGSLGNIFSHRNPLFLSLSHLTTHPNYLFLTPMHSLTLSASLSTSHNPSSQESHSRWRPMCLYHSQGKCTKMDDPIHLERFNHDFSRELQVNAPELNKICAQNLDFFLVLDLEGRVEILEFPVLMISAKTMQVEDIFHRFVRPSKMSEQRITEYIEGKYGKFGVDRVWHDTAIPFKEVIQQFEAWLMQHQLWMGGELNRAGFVTCGNWDLKTKVPQQCDVSKIKLPPYFMEWINLKDVYLNFYNRRQATGMVTMMKELQIPLVGSHHLGIDDTKNIARVLQHMLVDGALIQITARRNPKSHGDVNFLFKNRIR* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0139 317 SUPERFAMILY Ribonuclease H-like 106 288 IPR012337 -
Apr5g0139 317 CDD ERI-1_3'hExo_like 111 288 - -
Apr5g0139 317 Pfam Exonuclease 118 284 IPR013520 -
Apr5g0139 317 Gene3D - 100 314 IPR036397 GO:0003676
Apr5g0139 317 PANTHER OS06G0353400 PROTEIN 43 317 - -
Apr5g0139 317 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 43 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0139 Apr-Chr5 1229073 1233180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0139 - - lja:Lj3g3v0428960.2 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0139 5 1229073 1233180 Apr5g0139 5 1229073 1233180 ECH