Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0137 ATGGAAAGTGGGGTTGTGGCTGTGAATAACAGTAACTATGAATCCAAAGCAACTTCCACCATTACCATAAAGGGTATTCTGAGTCTTCTAATGGAGAGCATTGATGAGAATTGTTGTGATGGTGATGGCAAAAGAGTTATTTCTTTGGGTATGGGAGACCCAACTCTCACTACTTGCTTCCATGCTTCCACTGTTGTTGAAGAAGCTGTTGCTGATACTCTTAAATCTCACAAGTTTCATGGCTATGCCCCCACTGCCGGTCTACTTCAAGCCAGAATTGCAATTGCTGAATATCTGTCTGGTGACCTACCTTACCAGCTATCATCTGATGATGTTTTCATCACTTGTGGATGCACACAAGCCATTGACGTTTCGGTGGCGATGTTGGCACGCCCTGGTGCAAACATTTTGCTTCCAAGACCAGGCTTCCCAATCTATGAACTTTGTGCGGCATTTAGAGGAGTTGAAGTGAGGCATTATGATCTGCTGCCACAGAAAGATTGGGAGGTTGATCTAGATGCTGTTGAAGCTCTTGCAGATCAGAACACAGTTGCACTGGTGATTATAAACCCAGGGAATCCATGTGGGAATGTGTACAGTTACCATCATTTAGAGAAGATTGCTGAAACTGCAAAGCGGCTAGGAACAATTGTGATTTCTGATGAAGTATATGGTCACCTTGCTTTTGGGGCCAATCCTTTTGTGCCAATGGGAGTTTTTGGCTCTATTGTTCCTGTTCTCACTCTTGGGTCACTGTCTAAGAGATGGATAGTACCTGGATGGAGGCTTGGTTGGTTTGTGACAAATGATCCATGTGGCACTTTTAGAAAACCAAAGGTAGTTGAGCGCATTAAAAAGTATTTTGATCTTTTGGGAGGTCCAGCCACCTTCATTCAGGCGGCTGTTCCTCGGATAATTGCACATACAGAGGAGGTTTTCTTCAAGAAAACCATTGATAATTTGAGGCATACCGCAGATATATGTTGTAAAGAGATACAAGATATTCCATGCATTTTTTGCCCTTACAAACCAGAAGGGTCCATGGCTATGATGGTGAAACTTAACCTTTCACTTCTGGAAGATATTAGCGATGATATTGATTTCTGTTTCAAACTTGCAAAGGAGGAAGCTGTTATCATTCTTCCAGGAACTGCGGTGGGGCTAAAAGATTGGCTTCGTATCACTTTTGCTGCTGATCCATCTGCTCTTAGAGAGGGTATGAGAAGGATAAAAGCATTTTATCAAAGACATGCCAGAAGATTATAA 1266 0.4258 MESGVVAVNNSNYESKATSTITIKGILSLLMESIDENCCDGDGKRVISLGMGDPTLTTCFHASTVVEEAVADTLKSHKFHGYAPTAGLLQARIAIAEYLSGDLPYQLSSDDVFITCGCTQAIDVSVAMLARPGANILLPRPGFPIYELCAAFRGVEVRHYDLLPQKDWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYHHLEKIAETAKRLGTIVISDEVYGHLAFGANPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTNDPCGTFRKPKVVERIKKYFDLLGGPATFIQAAVPRIIAHTEEVFFKKTIDNLRHTADICCKEIQDIPCIFCPYKPEGSMAMMVKLNLSLLEDISDDIDFCFKLAKEEAVIILPGTAVGLKDWLRITFAADPSALREGMRRIKAFYQRHARRL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0137 421 Gene3D - 65 310 IPR015421 GO:0003824
Apr5g0137 421 Pfam Aminotransferase class I and II 45 410 IPR004839 GO:0009058|GO:0030170
Apr5g0137 421 TIGRFAM tyr_nico_aTase: tyrosine/nicotianamine family aminotransferase 14 418 IPR005958 GO:0006520|GO:0008483|GO:0030170
Apr5g0137 421 CDD AAT_like 47 412 - -
Apr5g0137 421 PIRSF Tyr_transaminase 2 420 IPR005958 GO:0006520|GO:0008483|GO:0030170
Apr5g0137 421 Gene3D Aspartate Aminotransferase, domain 1 48 413 IPR015422 GO:0003824
Apr5g0137 421 PANTHER TYROSINE AMINOTRANSFERASE 12 419 - -
Apr5g0137 421 SUPERFAMILY PLP-dependent transferases 39 416 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0137 Apr-Chr5 1216298 1223092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0137 K00815 - gmx:732650 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0137 5 1216298 1223092 Apr5g0137 5 1216298 1223092 ECH