Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0118 ATGGCTGCTTCTACGGAAAGCGTGGCATCACAGGCATACCTTGAAGGAAAAGCAGTGAAGGAAACACGAACTTTGATATCAGAACTGTGTCGCCACTTCTACAACCTTGGATGGGTCTCAGGCACTGGTGGCAGCATCACCATCAAAGTTCATGATCACTCTATTCCTAAATCTCACCAACTAATACTCATGTCCCCTTCAGGTGTTCAGAAGGAAAGAATGGAACCAGAGGACATGTATGTGTTATCCCACACTGGATCAGTCTTGTCTGCGCCATCTCCCAAGCCTTACCCACATAAACCTCCCAAGTGTTCTGATTGTGGTCCACTTTTCATGAAGATCACTCACATGGAAATGATAAAAGGAATCAAAGGGCATGGTTATTATGATGAACTTGTGGTCCCCATAATAGAGAACACAGCCTATGAATATGAACTCACAGAATCTCTAGCTAAAGCTATTGAAGCCTACCCTAAAACTACAGCAGTACTTGTACGCAACCATGGAATATATGTTTGGGGAGACTCATGGATCAGTGCTAAAACTCAGGCTGAGTGTTATCATTATCTCTTTGATGCTGCTATCAAACTTTCCCAACTAGGATTGGACTGGTCTACTCCAGATCATGGTCCAATACAAAGAAGCATTAGGAGTCTAAAGTTTGCTGGAGAGTCAAACACATCAACTAAGACAAAGACGGCTAATGGTGAAATTGATCCATTTCCACATTGCATTGTTCTTGACATTGAAGGAACTACTACTCCCATATCATTTGTTACTGAGGTTCTCTTCCCATATGCACGTCAAAATGTTGGGAGGCATCTATCTATGACATATGATACTCCTGAGACCCAAGCTGATCTTAAGTTGCTTCGCTCACAAGTTCAAAGTGATCTTGAACAAGGGGTTGCAGGTGCTGTGCCTATCCCCCTTGATGATGCTGGGAAAGAACAAGTCATTGCCGCATTAGTAACTAATGTAGAAGCTATGATTAAAGCAGATAGAAAGATCACTGCCTTGAAAGAGTTGCAGGGTCACATATGGCAAACTGGTTATGAGAATAATGAATTGAAGGGAATAGTTTTTGATGATGTACCAGAAGCTCTGGAAAAGTGGCATGCCTTGGGCATAAAGGTATACATATATTCCAGTGGTAGCAGGTTGGCACAAAGACTAATATTTGGACATACAATCCATGGGGACCTAAGAAAATATTTATCTGGCTTTTTTGACACCACAGTGGGTAACAAAAGAGAGACACACAGTTATGCTGAAATTTCTGCATCACTAGGTGTTGATAAGCCATCAGATCTATTGTTTGTAACTGATGTTTATCAAGAAGCTACAGCTGCTAAGGCAGCAGGCTTGGAGGTGATAATTTCTGTTCGACCTGGAAATGCGCCTCTCCCTGGAAATCATGGTTTCAAGACAATCAGTTCCTTCTGTGAGATATAA 1455 0.4199 MAASTESVASQAYLEGKAVKETRTLISELCRHFYNLGWVSGTGGSITIKVHDHSIPKSHQLILMSPSGVQKERMEPEDMYVLSHTGSVLSAPSPKPYPHKPPKCSDCGPLFMKITHMEMIKGIKGHGYYDELVVPIIENTAYEYELTESLAKAIEAYPKTTAVLVRNHGIYVWGDSWISAKTQAECYHYLFDAAIKLSQLGLDWSTPDHGPIQRSIRSLKFAGESNTSTKTKTANGEIDPFPHCIVLDIEGTTTPISFVTEVLFPYARQNVGRHLSMTYDTPETQADLKLLRSQVQSDLEQGVAGAVPIPLDDAGKEQVIAALVTNVEAMIKADRKITALKELQGHIWQTGYENNELKGIVFDDVPEALEKWHALGIKVYIYSSGSRLAQRLIFGHTIHGDLRKYLSGFFDTTVGNKRETHSYAEISASLGVDKPSDLLFVTDVYQEATAAKAAGLEVIISVRPGNAPLPGNHGFKTISSFCEI* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0118 484 Gene3D - 351 484 IPR023214 -
Apr5g0118 484 Pfam Class II Aldolase and Adducin N-terminal domain 26 114 IPR001303 -
Apr5g0118 484 Pfam Class II Aldolase and Adducin N-terminal domain 129 194 IPR001303 -
Apr5g0118 484 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 11 484 IPR027505 -
Apr5g0118 484 SFLD enolase-phosphatase 244 481 IPR023943 GO:0000287|GO:0019509|GO:0043874
Apr5g0118 484 Gene3D - 19 113 IPR036409 -
Apr5g0118 484 Gene3D - 114 211 IPR036409 -
Apr5g0118 484 Gene3D - 256 350 - -
Apr5g0118 484 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 7 113 IPR017714 GO:0005737|GO:0019509|GO:0046872
Apr5g0118 484 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 113 484 IPR017714 GO:0005737|GO:0019509|GO:0046872
Apr5g0118 484 Hamap Enolase-phosphatase E1 [mtnC]. 241 484 IPR023943 GO:0000287|GO:0019509|GO:0043874
Apr5g0118 484 SUPERFAMILY HAD-like 244 484 IPR036412 -
Apr5g0118 484 CDD HAD_EP 244 465 IPR023943 GO:0000287|GO:0019509|GO:0043874
Apr5g0118 484 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 244 480 IPR023943 GO:0000287|GO:0019509|GO:0043874
Apr5g0118 484 SUPERFAMILY AraD/HMP-PK domain-like 18 216 IPR036409 -
Apr5g0118 484 SMART Aldolase_II_2 24 195 IPR001303 -
Apr5g0118 484 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 113 484 - -
Apr5g0118 484 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 7 113 - -
Apr5g0118 484 Pfam haloacid dehalogenase-like hydrolase 244 455 - -
Apr5g0118 484 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 244 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0118 Apr-Chr5 1043112 1049683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0118 K16054 - gmx:100794485 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0118 5 1043112 1049683 Apr5g0118 5 1043112 1049683 ECH