Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0110 ATGAGTGGTGTGCAACTGCAAACTGCATCCCCTGCCTCGACCTTACAAGGGTCACAGAAAAATGAATGTTCAGTTACCGTAGCAACTGGTGCGGATTCAAAGCCTAAGAAGAAAATCTGCTGTGCTTGCCCTGACACTAAAAGGTTGCGAGATGAATGCATAGTGGAGCATGGTGAAGCAGCTTGTGCAAAATGGATTGAGGCTCACCGTCTGTGCCTCCGTGCTGAGGGATTCAATGTTTGA 243 0.4815 MSGVQLQTASPASTLQGSQKNECSVTVATGADSKPKKKICCACPDTKRLRDECIVEHGEAACAKWIEAHRLCLRAEGFNV* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0110 80 Gene3D CytochromE C oxidase copper chaperone 3 80 - -
Apr5g0110 80 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 40 80 - -
Apr5g0110 80 MobiDBLite consensus disorder prediction 1 20 - -
Apr5g0110 80 Pfam Cytochrome C oxidase copper chaperone (COX17) 36 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
Apr5g0110 80 SUPERFAMILY Cysteine alpha-hairpin motif 26 80 IPR009069 -
Apr5g0110 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
Apr5g0110 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0110 Apr-Chr5 968196 971103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0110 K02260 - gmx:100779570 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0110 5 968196 971103 Apr5g0110 5 968196 971103 ECH