Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0107 ATGGAGCCCCCAACAATATCATCATTTCTTCTCACGTCGTTGTTTCTCTTCACCACCATCACCCTTAACACTTTCTCATCCTATGCTTCTCAACTCACTTACACAGATCACTGTGCTTCTGTGGTTCTATACTCAAATCCAAACGAGTCCAAGTTCAAACTCTTCCCACATGGTCAATTCCAAGCTGGTTACTACCTTGGTGGTGACACAATTGTTGGTGCTGACTCTATCAGAACCTTGAGACAGAAACAAGTTACCCTTAGAGTCAAGAGTGTGTATGAAACTGATGTCTTAGGCATACTCAACATTGGAGCAACATTGATCCTACGTAGTGCCTCTTCCTACTACCGTGTGGGAAACTCCACACGTGGCAGTAGATTGAAGAACCACAAGCGTTTTCCAAGTTCAATGACCTTTAGGCTTGATGGGTTCTGGTCAGAATCTTCAGGGAAGCTTTGTATGGTTGGAACAGGATCTGGCTATAACATGCAACGTTTTGAGGTTGTTTTCAAGCTTTACAATGTTGTCAATTCTAGGAATACTATTTCTACTTTGCTTACTGGAAGCTTGGAGAGCTTGAGTTCTGAGCATGAGGTGAGTTATTTTGAACCCATTTCTATTTTTATTCTTCCAAGAATGGATTATGAATATACTTTGAATAATTATACTAAAGAAGCTAAGAATGAGTATTCTGATGAAGGTCTAGTGCCAGGTTTATCCATTAATCCGGGTGGTTTTTGCTCAAATATTTTTTCAATGATTAATGGTAAATTTGATTTGCAATATAATAGGGATTGCAATTCTGCAAAGAATTGTAGTCCTATTAATAGGGGTGATGCCAACCAATTGCCTTATATTGTGTCTCTGAGAGAATTGGTTTGTTCAGATGTTAAGCAAAAAGTGAGAGTGTTGATTGGCTTTCGCAATAGTGGTGCTCGCTGGTCTTTCAATCCTAATGCTACATTTGTCGGAGAAGGGTGGTGGGATGAGAAAAATAACCAATTGTATATAGTTGCTTGTCATTTCTTGGGCATGGAAGAATCAGTGGCTAGTGTTCATGTGGGTGATTGTTCAACAAGAATGAGCTTGAGGTTTCCAAAGATATGGTCAATCGAAGATGCAAGTAGCATTGTGGGCCAAATTTGGAGCAACAAAACTGAGGGGGATTTGGGTTATTTCAAGAGGATGGTTTTAAGAACTCCTCAGGACAGAAGGATTGAAATATCTGGCATAAAGTATGAGTATAGCCAATTGGACAAAGTCAGAAAGATGTGTCCAAGACAAGAACCTTTGAAGAACAAGGGAATAAGGTATCCAGATATATATTCTCCTGATATGAGATTTGACATGTCAGTTAGAAACTCTAAGAGGAGAATTGCCTGGGGTTATTCTGTTCCATTGGTTGTTAATGATCAGATTCAACTGTGGGACTTCGATGAAACCTTTCCTTCTAACTCCACCTATGCACATCCATTCATCTCTACAAACTCCAGCAGCTCTGGCTTCTACAATGTTAGCTACAAAATCAGCATCAATCTACTACCTAATGGCAAGTTAGGAGAAGAGAAGCCTATGTTAAATACTACAACAAATGCAACTGAGACCATGAATGTTTCAGCTGAGGGATTTTATGATGCTGAAGCTGGAAGCTTATGTATGGTAGGTTGCAGATATCTTGGCTCAAAGAACCAAATACCAACAACAAATTCTGTGGATTGTGAGGTTATTGTCAAGTTTCAGTTTCCACCACTACCTGCAGAGAACAATGGTTATATCAAGGGAAGTATTGAAAGCATGCGCGGAAATTCAGATCCTCTTTACTTCAAGCGGTTGGACATGACTTCAGCGGCATTTTACACAGCAGAAGCAACACAAATCTTAAGGAAAATAGATATGGAGGTCATAATGATTCTGGTTTGTACCACACTAGCATGTGTTTTTGTGGGCTTACAACTTTACCATGTGAGAAGAAATCCCGATATGCTTCCCTTAGTCTCCTTTGTCATGCTATTGATTCTTACTTTGGGAAATATGATACCTCTTGTTCTGAACTTTGAAGCCCTTTTTGCACAAAATCATGACAAGAAAAGCGCTTCACTTGGAAATGAATGGCTTGAAGTAAATGAAATTGCTGTAAGGCTAGTTGTAATGGTAGCTTTCTTGTTGCAACTTCGACTCCTGCAGGTAACTTGGTCATCAAGAAAGGCCGATATAAAGCAAAAGGACCTTTGGATTGCTGAGATGAAGGTTTTCTATGTGATTTTTCCTCTATATGCAGCAGGGTTCTTAATTGCATTGCTTGTACACCAAAACAATATTTTGCATGGTGAAATGGTGTCTTCATCTAGCCTTTTAGACCACCAACAGCACTCATATTGGGAGGACTTGAAATCTTATTCAGGGTTGGTACTAGATGGCTTTCTCTTGCCTCAAATTTTGTTTAACTTGTTTTGGAATTCCAAGGGGAACGCTCTTTCATTTTCATTTTACTTTGGAATCAGTTTGGTGAGATTGCTTCCTCATGCATATGATCTCTTTGAGTCTCTTGTTTATGTTGATGGTTCATCCTTATATGAGGATGAGATTGCAGACTATTACTCCACTGTTTGTGATATAATCATTCCTTTGGTAAGCTTGATGTTTGCTGTAATTATCTATTTGCAACAACGTTTTGGTGGTTGCAGCATTCTTTCTTGGAGAATCAAAGGTATAGAAAAATATGAAAAGGTGTCAGTTGTGACTGAGGGATAG 2751 0.3915 MEPPTISSFLLTSLFLFTTITLNTFSSYASQLTYTDHCASVVLYSNPNESKFKLFPHGQFQAGYYLGGDTIVGADSIRTLRQKQVTLRVKSVYETDVLGILNIGATLILRSASSYYRVGNSTRGSRLKNHKRFPSSMTFRLDGFWSESSGKLCMVGTGSGYNMQRFEVVFKLYNVVNSRNTISTLLTGSLESLSSEHEVSYFEPISIFILPRMDYEYTLNNYTKEAKNEYSDEGLVPGLSINPGGFCSNIFSMINGKFDLQYNRDCNSAKNCSPINRGDANQLPYIVSLRELVCSDVKQKVRVLIGFRNSGARWSFNPNATFVGEGWWDEKNNQLYIVACHFLGMEESVASVHVGDCSTRMSLRFPKIWSIEDASSIVGQIWSNKTEGDLGYFKRMVLRTPQDRRIEISGIKYEYSQLDKVRKMCPRQEPLKNKGIRYPDIYSPDMRFDMSVRNSKRRIAWGYSVPLVVNDQIQLWDFDETFPSNSTYAHPFISTNSSSSGFYNVSYKISINLLPNGKLGEEKPMLNTTTNATETMNVSAEGFYDAEAGSLCMVGCRYLGSKNQIPTTNSVDCEVIVKFQFPPLPAENNGYIKGSIESMRGNSDPLYFKRLDMTSAAFYTAEATQILRKIDMEVIMILVCTTLACVFVGLQLYHVRRNPDMLPLVSFVMLLILTLGNMIPLVLNFEALFAQNHDKKSASLGNEWLEVNEIAVRLVVMVAFLLQLRLLQVTWSSRKADIKQKDLWIAEMKVFYVIFPLYAAGFLIALLVHQNNILHGEMVSSSSLLDHQQHSYWEDLKSYSGLVLDGFLLPQILFNLFWNSKGNALSFSFYFGISLVRLLPHAYDLFESLVYVDGSSLYEDEIADYYSTVCDIIIPLVSLMFAVIIYLQQRFGGCSILSWRIKGIEKYEKVSVVTEG* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0107 916 Pfam Protein of unknown function (DUF2921) 36 896 IPR021319 -
Apr5g0107 916 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 12 915 IPR021319 -
Apr5g0107 916 PANTHER DUF2921 FAMILY PROTEIN 12 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0107 Apr-Chr5 948907 951657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0107 - - ccaj:109818444 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0107 5 948907 951657 Apr5g0107 5 948907 951657 ECH