Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0092 ATGCATCGTTCATTGTCAATGAACATTCAACACAGGTTTTTCAGCCAGCACAAACAAACCCGTGTGAATCAGGTCTTGGCAAAACGTGTTATTTTGGAGCCCTGTGACGTGTTCATAAACCATAGAAGCATGGACACCAAAAGAACTGTGGCTACTCTTCTGTATGATCATCTCTGCAGGCTAGGTTTTCACCCTTTCTTGGATAACAAGAACATGAAGCCAGGGGACAAACTGTTTGATAAAATCAACAGTGCAATCCTGCAGTGCAAGGTTGGGTTGGCTGTCATTTCACCACGTTACTGTGAGTCCTACTTTTGCCTTCATGAGTTGGCCCTTCTCATGGAGTGCAAGAAGAAGGTGATACCCATCTTCTGTGACATTAAGCCATCTCAGTTACGTGTCATCAAGAACAAAAAATGGACCCTTGAGAACCATCAGCGTTTCAAATTTGCTCTTGATGAAGCAAAGAACACTGTGGGACTCACCTTCAACTCTTCAGAAGGGAACTTCTCCGATATTGTGACCAGTGCTTCTGATATCATTATCAAGAGCTTAATAGAGCTTGAGGATGAAGAGCAGATGCAGCATCCAGACTTGCCAGCTGCTCTTTAG 612 0.4379 MHRSLSMNIQHRFFSQHKQTRVNQVLAKRVILEPCDVFINHRSMDTKRTVATLLYDHLCRLGFHPFLDNKNMKPGDKLFDKINSAILQCKVGLAVISPRYCESYFCLHELALLMECKKKVIPIFCDIKPSQLRVIKNKKWTLENHQRFKFALDEAKNTVGLTFNSSEGNFSDIVTSASDIIIKSLIELEDEEQMQHPDLPAAL* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0092 203 Gene3D - 3 159 IPR035897 -
Apr5g0092 203 SMART till_3 34 180 IPR000157 GO:0007165
Apr5g0092 203 PANTHER COP-1 INTERACTING PROTEIN 1 196 - -
Apr5g0092 203 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 196 - -
Apr5g0092 203 Pfam TIR domain 36 133 IPR000157 GO:0007165
Apr5g0092 203 ProSiteProfiles TIR domain profile. 33 156 IPR000157 GO:0007165
Apr5g0092 203 SUPERFAMILY Toll/Interleukin receptor TIR domain 35 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0092 Apr-Chr5 847552 849856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0092 37 185 Miscellaneous Gene Families AT1G57670 30.539 2.06e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0092 - - gmx:100526930 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0092 5 847552 849856 Apr5g0092 5 847552 849856 ECH