Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0088 ATGGCGGCGTTCCCTCTGTCTTCCTCCCTCAACAACATTTCCATCGCTCGCAGCACCGTTCGTTCCATTCGCCGTTCACGAATCACTTGCTTCTCCAAGAAGCACCACCAAGTCCTCACGAAGGAAGAGGTGGATCGAAGTGCCACGTCAGCAGGTGTTATTATCGTGAGGATGATGAAGCGGTTGAAGAGTGTGATTCCGATGGTAATTGCGTCGGTTCAGATGAGTGTTATGGTGGTTCCGTTGGTCGATTACGTGTCAGTTCCTACTGCGAAAGCGGTTCTGTATTCGCCAGATACCAAGGTTCCGAGAACTGGAGAAGTTGCTCTCAGAAAAGCAATTCCTGCAAACACCAACATGAAGGCTATACAGGACTCTCTTGAAGATATTTCGTACCTATTGAGGATTCCACAGAGAAAACCGTATGGAACAATGGAGGGGAATGTGAAGAAAGCTTTGAAGATAGCGGTAGATGAAAAAGATTCTATATTGGCAAGTATACCAGCGGAACTGAAGGACAGGGGCTCTTTGGTACATGCGTCTCTAATAGAAGGAAAGGGAGGCTTGCAAACTCTTCTTCAATCTATAAAGGAACAAGATGCAGATAAAGTATCTGTGAACCTTGCATCTACACTGGATACTGTAGCAGAGCTAGAGTTATTACAGGCACCTGGATTATCATTTCTATTGCCGGAGCAGTATGCGCAATATCCACGGCTTTCAGGGAGAGGAACTGTTGAGTTCACCATTGAGAAAGGAGATGGTTCTACATTTTCTCCAGTTGGGGGAGAACGGAAAAATACTGCCACCATTCAGGTTGTTATAGATGGATACTCGGCTCCATTAACTGCAGGGAATTTTGCAAAACTGGTGATGGATGGAGCATATAATGGTGCAAAGCTCAGCTCCACCAACCAAGCTATTCTCTCAGATAATGGAGTTGACAAGAACAGTGGTTACAATGTTCCCTTGGAAATAATGCCCTCTGGACAATTTGAGCCCCTTTACAAAACAACATTAAGTGTGCAGGACGGAGAACTGCCAGTTCTTCCTCTTTCTGTTTATGGGGCAGTTGCTATGGCTCATAATGAAGCCTCTGAGGAGTATTCATCACCTTATCAATTTTTCTTCTATCTCTATGATAAACGAAGTGCTGGTCTGGGAGGGATATCATTTGATGAAGGGCAATTTTCAGTTTTTGGATACACAACCACTGGGAGAGATATTCTCCCACAGATAAAAACTGGTGATGTTATTCGTTCAGCAAGGCTTATTGAAGGCCAAGATCGTCTTGTATTGCCGAAGGAAAGTTAG 1314 0.446 MAAFPLSSSLNNISIARSTVRSIRRSRITCFSKKHHQVLTKEEVDRSATSAGVIIVRMMKRLKSVIPMVIASVQMSVMVVPLVDYVSVPTAKAVLYSPDTKVPRTGEVALRKAIPANTNMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKALKIAVDEKDSILASIPAELKDRGSLVHASLIEGKGGLQTLLQSIKEQDADKVSVNLASTLDTVAELELLQAPGLSFLLPEQYAQYPRLSGRGTVEFTIEKGDGSTFSPVGGERKNTATIQVVIDGYSAPLTAGNFAKLVMDGAYNGAKLSSTNQAILSDNGVDKNSGYNVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEASEEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTTGRDILPQIKTGDVIRSARLIEGQDRLVLPKES* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0088 437 Gene3D - 264 429 IPR029000 -
Apr5g0088 437 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 19 436 IPR044259 -
Apr5g0088 437 SUPERFAMILY Cyclophilin-like 270 421 IPR029000 -
Apr5g0088 437 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 258 437 IPR002130 GO:0000413|GO:0003755
Apr5g0088 437 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 269 420 IPR002130 GO:0000413|GO:0003755
Apr5g0088 437 Gene3D - 116 221 IPR023222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0088 Apr-Chr5 799946 809680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0088 - - gmx:100806701 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0088 5 799946 809680 Apr5g0088 5 799946 809680 ECH