Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0084 ATGGCTATCTCAAGCAACAATGCCTTGGTATTTGTCATGCTGTTATTTACATTATGTGAAATGCAAATAATTGCAGGACAAGAAACTCGAACCTGCACCAACCGTGGTCCATGCTTCTTGAAAAAAATAAAATGCCCTCATCAGTGCCCTCATGCATCATCGCCAGACCCAAAAGCCAAAGTCTGTTCTGTTAACTGTAATTCTCCCACATGCGAAACTACCTGCAAACATCATAAACCAAATTGCAGAAGTCCAGGATCTGCATGCTTGGACCCTCGTTTTGTTGGAGCAGATGGCATTGTTTTCTATTTCCATGGAAGAAAAAATGAGCATTTCACCTTAGTATCAGATGTGAATTTCCAAATCAATGCACGTTTCATTGGCCTTAGGCCTGAAGGTAGAACAAGAGATTACACTTGGATTCAAGCATTAGGAATCCTCTTCGATTCCCATAAGTTTACCATTGAGGCCACACCAACATCATCATGGGGTGATGAAATTGACCATTTGAAATTCTCTCACAATGGAAAAGAACTTGTGATCCCAGATGGGTACCTCTCTACATGGCAATGTCCAGAAAATCAATTTAGAATAAAGAGAACATCAAGCAAGAACAGTGTTACTATTACTCTTCCAGAAGTAGCAGATATATCTCTCAATGTGGTGCCTGTGACTAAGGAAGATAGTAGAATCCACAACTATCAAATTCCTGATAATGATTGTTTTGCACACTTGGAGGTGCAGTTCAAATTCTATAGTCTATCCTCCAAAGTTGAAGGGGTTCTTGGAAGGACTTATCAACCTGATTTTCAAAATCCTGTTAAGTTGGGTGTGGCAATGCCAGTTGTTGGAGGGGAAGATAGGTACAGAACCACCTCACTTGTTTCTGCTGATTGTGGTGTTTGTTTGTTTGCTCCTGCTGAAGCTTTAGTAAATAAGAACCAAGTGATTGATTATGGGGTGCTTGATTGCACTGGTGTTGCCAACAGTGGGAATGGTATAGTTTGCAGAAGATAA 1017 0.4051 MAISSNNALVFVMLLFTLCEMQIIAGQETRTCTNRGPCFLKKIKCPHQCPHASSPDPKAKVCSVNCNSPTCETTCKHHKPNCRSPGSACLDPRFVGADGIVFYFHGRKNEHFTLVSDVNFQINARFIGLRPEGRTRDYTWIQALGILFDSHKFTIEATPTSSWGDEIDHLKFSHNGKELVIPDGYLSTWQCPENQFRIKRTSSKNSVTITLPEVADISLNVVPVTKEDSRIHNYQIPDNDCFAHLEVQFKFYSLSSKVEGVLGRTYQPDFQNPVKLGVAMPVVGGEDRYRTTSLVSADCGVCLFAPAEALVNKNQVIDYGVLDCTGVANSGNGIVCRR* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0084 338 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 4 338 - -
Apr5g0084 338 Pfam Root cap 248 304 IPR009646 -
Apr5g0084 338 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 4 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0084 Apr-Chr5 774327 776098 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0084 - - gmx:100808294 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0084 5 774327 776098 Apr5g0084 5 774327 776098 ECH