Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0029 ATGGCAATCTTTAACACTCCCTCCACAGTCTTTTTGTCCTTCTCTCTCCTCCTATTTCTCTCTCCACAACTTTCTCACTCTTCCTCCTCCATCCATGATCTTCTCCGTTCAAAAGGGTTACCAGCTGGTCTCTTACCAGAGGAGGTAAAGTCCTATACTTTCTCAGAAAATGGACACTTGGAAGTGTTCCTAGATGCACCTTGCTTGACAAAGTACGAGAACAGGGTCCTGTTTGAACAAGTTGTCACTGCTAACCTCACCTATGGTAGCCTCATAGGAGTGGAGGGTCTCCAACAAGAAGAGTTGTTTGTGTGGCTACCTGTTAAAGACATTATAGTAAATGATCCATCTTCAGGGTTGATACTATTTGACATTGGAGTTGCCCACAAACAGCTTTCTCTGTCTCTCTTTGAAGATCCACCTCACTGCAAGCCAGAAGGTGAGTTGAGGAATCATGTGAGGAAGGAAAAAGGATTTGAGGCCTTGAGGTAG 492 0.4451 MAIFNTPSTVFLSFSLLLFLSPQLSHSSSSIHDLLRSKGLPAGLLPEEVKSYTFSENGHLEVFLDAPCLTKYENRVLFEQVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGVAHKQLSLSLFEDPPHCKPEGELRNHVRKEKGFEALR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0029 163 Pfam Protein of unknown function, DUF538 32 138 IPR007493 -
Apr5g0029 163 PANTHER - 9 162 - -
Apr5g0029 163 Gene3D - 19 144 IPR036758 -
Apr5g0029 163 SUPERFAMILY At5g01610-like 13 145 IPR036758 -
Apr5g0029 163 PANTHER T31J12.3 PROTEIN-RELATED 9 162 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0029 Apr-Chr5 213571 215305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0029 - - gmx:100790931 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0029 5 213571 215305 Apr5g0029 5 213571 215305 ECH