Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0026 ATGAGGGTTGTTGGTATTACTACTAGTATTACCCTTTTCCTCATTGCACCACTCCTTGGGAAGGCAGAATCAATAACCAGAGCAGATTTTCCAAAGGGGTTTATCTTTGGAACTGCTTCTTCAGCTCACCAGTTTGAGGGTGCTGTTGATGAAGGAAATAAAGGAGATAGCATATGGGATACTTTTTCAAGGATACCAGGGAGAATTGTGGACTTCAGTAACGCAGACATGGCAGTGGATCAATATCACCGATTTCAGAATGATGTAAACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATCTCATGGCCAAGAATTTTCCCAAATGGAACAGGGGAACCCAATACAGAGGGAATAAATTATTACAACAGCCTCATTGATGCTTTACTAGAAAAAGGAATCCAGCCTTTTGTAACTCTATATCATTGGGATCTTCCACAGATGCTTGAAGATAAATATGAAGGATGGCTAAGCAAACAAATCATAAAAGATTTTGAGCATTATGCCTATACCTGCTTCCAAGCTTTTGGCGACAGAGTTAAGCACTGGATTACCTTCAATGAGCCTCACAACTTTGCACTTCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTTTGGGTCATCTTCTATGCAAGAAGGGAAAATCATCCACTGAGCCATATATTGTTGCTCATAACATTCTCTTATCCCATGCAGCTGCCTATAGAAGTTATCACCAACATTTCAAGCATCAACAAGAAGGTCAAATAGGGATAGCACTAGATGCCATTTGGTATGAACCCATAACAGAACTTGATGAAGACAGAGATGCAGCAGCAAGAGCTATGGACTTTTCACTTGGATGGTTCCTTGACCCACTTTTCTTCGGAAAATATCCACTCTCAATGAGAAAACTTGTAGCTGAGAGATTGCCAGAGATTTCTGATGACAACTCAAACCTGCTTGTGGGATCTTTGGATTTTATTGGCATAAATCACTATACTTCTGTGTATACTCGTAATGACAGGACTAAGATTCGAAAACTGGTTATGCATGATGCTACTACTGATGCTGCTGTCATTACAACTGCATACCGAAGAGGATCTGCAATTGGAGAAAAGGCAGCTTCAGGTTGGCTGCATATTGTTCCGTGGGGCATCCGAAAGTTGGTTAAACATGTGAAAAGCAAATATGGGAACACACCAGTAATTATAACAGAGAATGGAATGGATGACCCAAATGGACCCTTTATGAACATACAAAAGGCATTAAGAGATGACAAGAGGATAAGATACCATAGGGACTATCTCTCAAACCTATCTGCAGCTATAAGGCAAGACGATTGCAATGTACGTGGTTACTTTGTATGGTCATTACTTGACAATTGGGAGTGGAACATGGGATATACTGTACGCTTTGGACTCTACTATGTGGATTTCAGGAACAACCTTACTAGGATACCAAAAGACTCGGTGCAATGGTTCAAAAACATGCTCAGATTAGAAACAGAAACGAGTAGTGAAATTTGA 1530 0.4026 MRVVGITTSITLFLIAPLLGKAESITRADFPKGFIFGTASSAHQFEGAVDEGNKGDSIWDTFSRIPGRIVDFSNADMAVDQYHRFQNDVNLMKDLGMDSYRFSISWPRIFPNGTGEPNTEGINYYNSLIDALLEKGIQPFVTLYHWDLPQMLEDKYEGWLSKQIIKDFEHYAYTCFQAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGHLLCKKGKSSTEPYIVAHNILLSHAAAYRSYHQHFKHQQEGQIGIALDAIWYEPITELDEDRDAAARAMDFSLGWFLDPLFFGKYPLSMRKLVAERLPEISDDNSNLLVGSLDFIGINHYTSVYTRNDRTKIRKLVMHDATTDAAVITTAYRRGSAIGEKAASGWLHIVPWGIRKLVKHVKSKYGNTPVIITENGMDDPNGPFMNIQKALRDDKRIRYHRDYLSNLSAAIRQDDCNVRGYFVWSLLDNWEWNMGYTVRFGLYYVDFRNNLTRIPKDSVQWFKNMLRLETETSSEI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0026 509 PANTHER BETA-GLUCOSIDASE 41-RELATED 18 500 - -
Apr5g0026 509 SUPERFAMILY (Trans)glycosidases 21 499 IPR017853 -
Apr5g0026 509 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 34 48 IPR033132 -
Apr5g0026 509 PRINTS Glycosyl hydrolase family 1 signature 325 339 IPR001360 GO:0004553|GO:0005975
Apr5g0026 509 PRINTS Glycosyl hydrolase family 1 signature 403 411 IPR001360 GO:0004553|GO:0005975
Apr5g0026 509 PRINTS Glycosyl hydrolase family 1 signature 426 437 IPR001360 GO:0004553|GO:0005975
Apr5g0026 509 PRINTS Glycosyl hydrolase family 1 signature 448 465 IPR001360 GO:0004553|GO:0005975
Apr5g0026 509 PRINTS Glycosyl hydrolase family 1 signature 472 484 IPR001360 GO:0004553|GO:0005975
Apr5g0026 509 Gene3D Glycosidases 18 500 - -
Apr5g0026 509 Pfam Glycosyl hydrolase family 1 28 500 IPR001360 GO:0004553|GO:0005975
Apr5g0026 509 PANTHER GLYCOSYL HYDROLASE 18 500 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0026 Apr-Chr5 189554 194318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0026 22 445 Glycoside Hydrolase AT5G54570 71.059 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0026 K01188 - gmx:100783543 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0026 5 189554 194318 Apr5g0026 5 189554 194318 ECH