Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0022 ATGTCAAACATGGCAGCCTCATCAGTTCCTGTTTTGGTGCAGAATGCAAAACCCACTTCAGATGTCACTCGCCGTTGCGCTAATTTTCATCCTTCCGTTTGGGGGGATTATTTCCTTACCATTCCTATCTCTTTGGAAGGGGATACCGACATGAAACAAATTCAAACATTAAAAGAGGAAGTGAGGAAGAAGCTTGTCTCTTCTATTGATAACAATTTCTCTTATATGTTAAACTTCATCGACTCAGTCCAACGCTTGGGTATTTCTTACCATTTTGGACATGAAATTGATGAAGCATTGCACCAAATTTACAGCACTTCAACGAAGGACAATAATATTACAACTCAGAATGATGATCTTCATCATCTGGCTCTACTCTTTCGGTTGCTTAGGCAACATGGATATCGCATTTCATCAAATGTATTTTACAAATTCAAGGACCAAACCGGACTCTTCATTGAAAGTGTAGCTGACGATATTAAAGGAATATTGAGTCTCTATGAAGCAGCCCAGCTAAGATTTCATGGAGAGGAGATACTTGATGAAGCACATGATTTCGCTCACGCTCAATTAACAAAGTCTCTAACCACCCAATTGAGCCCTTCTCTTGCTGCAAAAGTGCGCCACAGCTTAGAACAATCACATCGCAAGGGAATGCCTAGGTTGGAGGCAAGATATTATATATCTTTCTATCAGGAAGATCCTTCCCATGATGAAAATTTGTTAACCTTTGCAAAATTAGATTTTAATATCCTGCAGAAGCTACATCAAAAAGAAGTCAGCAGTCTCACCAAGTGGTGGAATAAGGATTTAAATGTCTCGGCAAAATTTCCTTTTGCACGGGATAGGATTGTGGAAGGTTGCTTTTGGGTTTTGGGGATCTACTTTGAGCCGCAGTATTCTCTTGCTAGAAGGATAATGATGAAAATAATGGCCATATCATCCATCATTGATGACATCTATGACGCCTATGGAACCATTGACGAGCTAGAGCTTTTCACCAAAGTAATAGAGAGGTGGGATATATGTTGCCTGAATGATCTCCCAGATTACATGAGATTATGTTATACGGCACTTTTGGATATTTTTGAAGAAATAGAGCAAGAGATGAGACAGAAAGGAAAAGCATATTGCATCGAGTATGCCAAGAAAGAAATGAAAAGACTGATCCAAGCTTACATTACTGAGGCAAGATGGTTTCATTGCAACTACACACCAACAGTGGAGGAGTACATGAAAGTCGGAACATTATCATGTGGTTACGCTATGCTGACAACCGTCTCTTTCATCGGCATGGAAGACTCAACAGAGGAGGCTTTCAGATGGGCAACGAGTGACCCAATAGTTATCGTTGCTGCTTCAACTCTTTGTAGGCTCATGGATGACATTGTTGGACACGAGTTTGAGCAGAAAAGAGGACACGTAGCCTCAAGCCTTGAATGCTATATGAAACAACACAATACCTCAAGGCAAGAGGCCATTGAAGAACTACTTAAGGTAATTGAGAGTGCTTGGAAGGATATTAATGACGCATGCCTTGATCCTATTCCATTACCATTGGCCTTTCTTATGCGAGTTGTCAACCTTGCGCGAATGATGTATGTGCTTTACAAGGAAGAAGATAGCTATACAAATTCTAGAGGAATAATGAAAGGTTACATCGAAGCTTTACTAATTAATAAGATGCTTGTATAA 1695 0.4 MSNMAASSVPVLVQNAKPTSDVTRRCANFHPSVWGDYFLTIPISLEGDTDMKQIQTLKEEVRKKLVSSIDNNFSYMLNFIDSVQRLGISYHFGHEIDEALHQIYSTSTKDNNITTQNDDLHHLALLFRLLRQHGYRISSNVFYKFKDQTGLFIESVADDIKGILSLYEAAQLRFHGEEILDEAHDFAHAQLTKSLTTQLSPSLAAKVRHSLEQSHRKGMPRLEARYYISFYQEDPSHDENLLTFAKLDFNILQKLHQKEVSSLTKWWNKDLNVSAKFPFARDRIVEGCFWVLGIYFEPQYSLARRIMMKIMAISSIIDDIYDAYGTIDELELFTKVIERWDICCLNDLPDYMRLCYTALLDIFEEIEQEMRQKGKAYCIEYAKKEMKRLIQAYITEARWFHCNYTPTVEEYMKVGTLSCGYAMLTTVSFIGMEDSTEEAFRWATSDPIVIVAASTLCRLMDDIVGHEFEQKRGHVASSLECYMKQHNTSRQEAIEELLKVIESAWKDINDACLDPIPLPLAFLMRVVNLARMMYVLYKEEDSYTNSRGIMKGYIEALLINKMLV* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0022 564 Gene3D - 71 237 IPR036965 GO:0010333|GO:0016829
Apr5g0022 564 PANTHER TERPENE SYNTHASE 2-RELATED 19 543 - -
Apr5g0022 564 CDD Terpene_cyclase_plant_C1 24 560 IPR044814 GO:0010333|GO:0016102
Apr5g0022 564 SUPERFAMILY Terpenoid synthases 237 561 IPR008949 -
Apr5g0022 564 Pfam Terpene synthase family, metal binding domain 242 507 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr5g0022 564 Gene3D Farnesyl Diphosphate Synthase 31 551 IPR008949 -
Apr5g0022 564 SFLD Isoprenoid Synthase Type I 239 562 - -
Apr5g0022 564 PANTHER OS04G0344100 PROTEIN-RELATED 19 543 - -
Apr5g0022 564 Pfam Terpene synthase, N-terminal domain 34 211 IPR001906 GO:0010333|GO:0016829
Apr5g0022 564 SFLD Terpene Cyclase Like 1 C Terminal Domain 239 562 IPR034741 -
Apr5g0022 564 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 30 237 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0022 Apr-Chr5 158762 164026 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0022 K15803 - gmx:100801358 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0022 5 158762 164026 Apr5g0022 5 158762 164026 ECH