Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0020 ATGTCAAATGTTGCAGCCACACCATCACTTCCGATTTTGGTGCAGAATGCAAAACCCACCTCAGAAAACACTCGCCGTTGTGCAAATTTTCACCCTACCATTTGGGGGGATTATTTCCTTGACCATGTTCCTGCCCTTATGGAAGTGGATGAAATAAAGGAGGAGCATATTAGAATATTAAAAGAAAAAGTAAGAAAGATGTTAGTTCTAGTAAATGATAGGGCCTTAACGCCTAAGGACGCTAACCTGATTGATTCAATCCAACGCTTGGGATTATACTATCAGTTTGAACACGAGATTGATGATGTGTTGCAACATATTCACAGAAACTATGTAGAAAATGGCATAATAACCTTCAATGGAGATCTCCATTCTATTGCTCTTGTCTTTAGATTACTGAGGCAACAAGGATATAACATTTCGTCCGATGTTTATAAGAAGTTCAAGAATGAACAAGGAAAATTCAATGACAGACTTGTTGCTGATGTGGAGGGAATGTTGAGCTTGTACGAAGCTGCCCATCTCAGGATTCACGGAGAAGATATATTGGAAGAAGCTCTTGCATTCACTTCTTCACACCTTGAGCTCATGATGACCACCCAATTGTGTCCCTCTCTTGCCACACGAATTAATCATAGCTTAAAGAGGCCACTTCGCAAGAACCTGCCAAGGCTAGTGGCGAGGCATTACATTTCTACTTACGAAAACGACCCTTCTCATGATAAAAATTTGCTATTACTTGCCAAGTTAGATTTTAATATGCTTCAAAGGCAACATCACAAGGAAATTAGCGACATTACAAAGTGGTGGAAAGATTTGGATTTTGCAACAAAATTGCCTTTTGCACGCGATAGGATGGTAGAAGCTTACTTTTGGATATTAGGAGTGTATTTTGAGCCCCAGTACTCCCTTGGTAGAAGGTTAATGACCAAGGTGATATCCGTGACATCAATAATTGATGATATATACGATGTTTATGGTACATTAGAAGAGCTACAACTTTTCACGGAAGCAATCAAAAGGTGGGATATTAGCTGCATGGATTTTTTACCAGAGTACATGAGAAGTTGTTATCAAGCTCTCATGGATGTATATAAGGAAATTGAGCAAGAAATGAGCAAAGAAGGAAGAGCACTTTTCGTGACCTATGCCAAAAATGAAATGAAAAGATTGGTCGAGGCCTACTTGGCTGAGGCAATATGGTTTAATAGCAATTATATACCAACAATGGAAGAATACATGGATGTTGCACTAGTGACTTCAGCTTACCGTATGCTCATAGCAACAGCCTTCCTTGGGATGGGTAGTATTGCTACAGAAAAGGCCTTCCAATGGTTAACTAATGACCCTAAAATTGTGAAGGCTTCAACAATTATTGGCAGACTCATGGATGATATAGTTTCCAATGAGTTTGAGCAGAAGAGAGGGCATGTTGCTTCGGCCCTTGAGTGCTACATGAAGCAACATAGTGTCACAAAGCAAGAAGCCAATCATGAATTTTATAGACAAGTGACAAGTGCTTGGAAGGATATCAACGAGGAATGCCTTGACCCTACTGAAGTGCCAAAGCCTCTCCTTATGCGAGTCCTCAATTTATCTCGTGTGATTGATGTTCTTTATAAAGATGGAGACTGCTACACCAACTCCAAAGGATCAACAAAAGATGACGTTGAAGCCCTCCTCTTGAATCCATGGCCAGTATGA 1704 0.4014 MSNVAATPSLPILVQNAKPTSENTRRCANFHPTIWGDYFLDHVPALMEVDEIKEEHIRILKEKVRKMLVLVNDRALTPKDANLIDSIQRLGLYYQFEHEIDDVLQHIHRNYVENGIITFNGDLHSIALVFRLLRQQGYNISSDVYKKFKNEQGKFNDRLVADVEGMLSLYEAAHLRIHGEDILEEALAFTSSHLELMMTTQLCPSLATRINHSLKRPLRKNLPRLVARHYISTYENDPSHDKNLLLLAKLDFNMLQRQHHKEISDITKWWKDLDFATKLPFARDRMVEAYFWILGVYFEPQYSLGRRLMTKVISVTSIIDDIYDVYGTLEELQLFTEAIKRWDISCMDFLPEYMRSCYQALMDVYKEIEQEMSKEGRALFVTYAKNEMKRLVEAYLAEAIWFNSNYIPTMEEYMDVALVTSAYRMLIATAFLGMGSIATEKAFQWLTNDPKIVKASTIIGRLMDDIVSNEFEQKRGHVASALECYMKQHSVTKQEANHEFYRQVTSAWKDINEECLDPTEVPKPLLMRVLNLSRVIDVLYKDGDCYTNSKGSTKDDVEALLLNPWPV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0020 567 Pfam Terpene synthase, N-terminal domain 34 214 IPR001906 GO:0010333|GO:0016829
Apr5g0020 567 Gene3D Farnesyl Diphosphate Synthase 32 555 IPR008949 -
Apr5g0020 567 CDD Terpene_cyclase_plant_C1 25 564 IPR044814 GO:0010333|GO:0016102
Apr5g0020 567 Pfam Terpene synthase family, metal binding domain 245 510 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr5g0020 567 SFLD Isoprenoid Synthase Type I 242 565 - -
Apr5g0020 567 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 240 IPR008930 -
Apr5g0020 567 SUPERFAMILY Terpenoid synthases 240 567 IPR008949 -
Apr5g0020 567 SFLD Terpene Cyclase Like 1 C Terminal Domain 242 565 IPR034741 -
Apr5g0020 567 Gene3D - 73 240 IPR036965 GO:0010333|GO:0016829
Apr5g0020 567 PANTHER OS04G0344100 PROTEIN-RELATED 21 549 - -
Apr5g0020 567 PANTHER TERPENE SYNTHASE 2-RELATED 21 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0020 Apr-Chr5 143753 152374 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0020 K15803 - aprc:113865764 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0020 5 143753 152374 Apr5g0020 5 143753 152374 ECH