Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0013 ATGTCAGTTTCAGCAACTTCGTCGTTAAGTCCCCCAATTCCTATTGCTTCCTCCAACTTCTCTCGACGTTCAGCTGACTATCATCCCACCGTTTGGGGCGATCGATTTATTCAATATGTTTTGGAAGCTACGGAAGTGGATGGAATCATCGATGAGCATTTTATAATATTAAAAGAAAAGGTGAGAAAGATGCTAGTCCCTGAGAATGAGAATGCCATAAGATCCTTGGAGGATGCTAAATTGATTGATTCAATCCAACGGTTGGGAATATACTATCATTTTGAACACGAGATTGAACTTGTGTTGCAAAGTATTCATCATAACTATGTTGAAAATGGTGTAATAACTCAAATTGGAGACCTCTGTTCTCTTGCCCTTGTCTTTAGGTTACTTAGGCAACAAGGATATCACATTTCGCCTGGTATTTTTAAGAAGTTCAAGAATGAGGAAGGAAAATTCAATGAAGCACTTACTACGGATGTTGAGGGAATTTTAAGCTTGTACGAAGCTACACATCTCAGGATTCATGGAGAAGACATATTAGATGAAGCTCTGGCTTTCACTTCCTCACACCTTGAGTACATGACCACCCAATTGAGCCCCTCTCTTGCAGCAAAAGTTAATCATAGTTTAAAGTGGCCACTGTACAAGAACTTGCCAAGACTAGTGACAAGGCATTACATTTCTACTTATGAAGAAGACCCTTCCCATGATGAAACTTTGCTACTGTTTGCCAAATTAGATTTTAACGTACTTCAAAAACAACATCAGAAAGAAGTTGGTAGTATTTCAAAATGGTGGAAAGATTTGGATTTTGCAACAAAACTTCCTTTTGCACGTGATAGGCTGGTGGAAACATACTTTTGGTCATTAGGGGTGTATTTTGAGCCCCAGTATTCTCTCGGTAGAAGAATAATGACCAAGGTGACATCCATGGCATCAATAATTGATGATATATATGATGTTCACGGCACATTTGAAGAGCTACATCTTTTTACTTATGCAATAGAAAGGTGGGATATTAGCTGCATGGATTTTCTCCCAGAATATATGAAAATTTGCTATCAAGCACTCTTGGATATTTTTAAAGAAATTGAGCAAGAGATGGACAAAGAAGGAAGAGCATTTTGTGTAATCTATGTTAGAAATGAAATAAAAAGATTGATCCAAGCATACTTTGCTGAAGCCAAATGGCTAAATAGCAATTACACACCGACAGTGGAAGAGTACATGCGTGTTGCACAAGCATCTTCTGGTTATCGTCTGCTCACAGCCATAGCCTTTGTTGGGTTGGGATGTATTGCTACGGAAAAGGTTTTCCAGTGGTTAACCAGTGATCCTAAACTTATAAATGCTTCAACCAAAATTAGTAGGCTCATGGATGATGTTGTTTCCAACGAGCTTGAACAAAAGAGGGGGCATGTTGCCTCTGCCCTTGAGTGCTACATAAGGCAACACAGTGTCACAAGACAAGATGCCGTTGACGAATTATATAGACAAGTTATGAATGCATGGAAGGATATCAATGAGGAAGGCCTTGAACCTGCTGAAGTGCCAAAGCCTCTTCTCAAAGTAGTTCTCAACCTGTCACGAGTAATGCATGTGCTTTACAATGATGGAGATTGCTACACCCACTCTGAAGGATCAACAAAGAAAGACATTGCTGCTCTCCTATTGAATTCATGGCCAGTATGA 1695 0.3941 MSVSATSSLSPPIPIASSNFSRRSADYHPTVWGDRFIQYVLEATEVDGIIDEHFIILKEKVRKMLVPENENAIRSLEDAKLIDSIQRLGIYYHFEHEIELVLQSIHHNYVENGVITQIGDLCSLALVFRLLRQQGYHISPGIFKKFKNEEGKFNEALTTDVEGILSLYEATHLRIHGEDILDEALAFTSSHLEYMTTQLSPSLAAKVNHSLKWPLYKNLPRLVTRHYISTYEEDPSHDETLLLFAKLDFNVLQKQHQKEVGSISKWWKDLDFATKLPFARDRLVETYFWSLGVYFEPQYSLGRRIMTKVTSMASIIDDIYDVHGTFEELHLFTYAIERWDISCMDFLPEYMKICYQALLDIFKEIEQEMDKEGRAFCVIYVRNEIKRLIQAYFAEAKWLNSNYTPTVEEYMRVAQASSGYRLLTAIAFVGLGCIATEKVFQWLTSDPKLINASTKISRLMDDVVSNELEQKRGHVASALECYIRQHSVTRQDAVDELYRQVMNAWKDINEEGLEPAEVPKPLLKVVLNLSRVMHVLYNDGDCYTHSEGSTKKDIAALLLNSWPV* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0013 564 PANTHER TERPENE SYNTHASE 2-RELATED 5 546 - -
Apr5g0013 564 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 237 IPR008930 -
Apr5g0013 564 SFLD Terpene Cyclase Like 1 C Terminal Domain 238 561 IPR034741 -
Apr5g0013 564 CDD Terpene_cyclase_plant_C1 22 560 IPR044814 GO:0010333|GO:0016102
Apr5g0013 564 Pfam Terpene synthase family, metal binding domain 242 507 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr5g0013 564 SUPERFAMILY Terpenoid synthases 237 563 IPR008949 -
Apr5g0013 564 Gene3D Farnesyl Diphosphate Synthase 29 552 IPR008949 -
Apr5g0013 564 Gene3D - 70 237 IPR036965 GO:0010333|GO:0016829
Apr5g0013 564 PANTHER OS04G0344100 PROTEIN-RELATED 5 546 - -
Apr5g0013 564 Pfam Terpene synthase, N-terminal domain 32 211 IPR001906 GO:0010333|GO:0016829
Apr5g0013 564 SFLD Isoprenoid Synthase Type I 238 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0013 Apr-Chr5 104879 108102 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0013 K15803 K14183 aprc:113865764 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0013 5 104879 108102 Apr5g0013 5 104879 108102 ECH