Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0012 ATGTCTGCTTCATCTTTAACACTCGGTTGCTTCAACCCAGATGTGAAATCTGGCATGCATCGACATGTTGCAGATTTTCACCCTAGCATTTGGAGGGATTATTTCCTTCAATATGCATCAGAATCTACGGAACATGATCATAACATTGGGATGCAACTTGAAGCACTTAAAAGAGACGTGAGCAAGATGCTTGTTTCAACAAAGACGGAGAAGCCCATAGCAAAAGTTGAGTTGATAGATTCAATCTGTCGTTTGGGTGTGAACTATCACTTTGAGGATGAGATTGAAGAGGTTTTGCAGCATATTCACAAGAACTATGTTGAAAAAGGAGAAATAACTCTTGAAGCCAACCTTTGCTCTCTTGCTGTGCTGTTTAGGTTATTGAGGCAACATGGTCTCCACGTTTCTCCTCTTGTGTTCAACAAGTTCAAGGATGAGCAAGGAAACTTTAGTGAGAGCCTTATTACTGATGTTGAAGGAATGCTAAGCTTGTATGAAGCCTCACATGTGATGGTTCATGGAGAGGACATTTTAGAAGAAGCTTTTGCTTTCACTTCCACTCACCTTGCGTCCATTGTCACCACGTTGAACCCTTCTCTTGCAGCACAAGTCAACCATAGTTTAAGGCAAGCTATCCACAAGAACTTACCCAGGCTAGAGGCTCGACGATACATTTCTATCTATGAGCAAGATCCTTCACATAATGAAACTTTACTGACTTTAGCAAAATTAGATTTCAATATATTGCAAAATCTACATCAAAAAGAGTTTGGCTACATATGCAAGTGGTGGAATGAGTTGGATGTCCCTGGTAAACTACCATTTGCTCGAGACAGAATTGTGGAATGTTGCTTTTGGATCTTGGCTATATATTTTGAGCCTGAATATTCCCAAGCAAGAAAAATAATTATGAAAGTAATTGCCGTGTTATCAATTATTGATGATACTTATGATGCATATGGAACCGTTGACGAATTAGAACTTTTGACTGAGGCAATTGAAAGGTGGGATATTAATTTCTCGGCTGATCTCCCAGAATACATGAAATTAACTTACAAGTCACTCTTAAAGGTTTATGAAGACATAGAGCAAGAAATGATGGAGGAGAGAAGAGCATATTGTGTTAACTACGGCATAAAAGAATTCAAAAATGTGGTCCAAGCCTACATGACTGAGGCCAGATGGCTCAACAACAACTATATTCCAACAACAGAGGAATACATGCAGATATCAACAATATCATGTTGTTACAAATTGCTGACGACAACAAGTTACATTGGCATGGGAGAAACAGCCACAGAGGACATCTTTAAATGGGTAACAAATGGGCCAAAAATTGTTAATGCTTCTTCCGTTGTTTGCAGGTTAATGGATGACATTGTGTCCAACGAGTTTGAACAGAAAAGAGGACACGTTTCCTCATTCTTGGAATGCTATATGAAGCAATGTGGTGTGTCTAGGGAAGTTGCCATCAATGAATGCCAAAAGAAAATAGCAAATGCTTGGAAGGATATTAATGAGGAATTTCTTAGGCCAACCACAGTTCCAATGCCTTTTCTAACGCGTGTTCTCAATTTGTCACGCTTCATGGATGTGATCTACAAAGATAAAGATAACTACACACATGCTGAAGGAGTAATGAAGACATATATTAAAGATTTGCTTGTTGATCCCCTGCCAATATGA 1686 0.3897 MSASSLTLGCFNPDVKSGMHRHVADFHPSIWRDYFLQYASESTEHDHNIGMQLEALKRDVSKMLVSTKTEKPIAKVELIDSICRLGVNYHFEDEIEEVLQHIHKNYVEKGEITLEANLCSLAVLFRLLRQHGLHVSPLVFNKFKDEQGNFSESLITDVEGMLSLYEASHVMVHGEDILEEAFAFTSTHLASIVTTLNPSLAAQVNHSLRQAIHKNLPRLEARRYISIYEQDPSHNETLLTLAKLDFNILQNLHQKEFGYICKWWNELDVPGKLPFARDRIVECCFWILAIYFEPEYSQARKIIMKVIAVLSIIDDTYDAYGTVDELELLTEAIERWDINFSADLPEYMKLTYKSLLKVYEDIEQEMMEERRAYCVNYGIKEFKNVVQAYMTEARWLNNNYIPTTEEYMQISTISCCYKLLTTTSYIGMGETATEDIFKWVTNGPKIVNASSVVCRLMDDIVSNEFEQKRGHVSSFLECYMKQCGVSREVAINECQKKIANAWKDINEEFLRPTTVPMPFLTRVLNLSRFMDVIYKDKDNYTHAEGVMKTYIKDLLVDPLPI* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0012 561 PANTHER TERPENE SYNTHASE 2-RELATED 16 541 - -
Apr5g0012 561 SUPERFAMILY Terpenoid synthases 234 559 IPR008949 -
Apr5g0012 561 SFLD Isoprenoid Synthase Type I 234 559 - -
Apr5g0012 561 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 234 IPR008930 -
Apr5g0012 561 PANTHER OS04G0344100 PROTEIN-RELATED 16 541 - -
Apr5g0012 561 Pfam Terpene synthase, N-terminal domain 30 208 IPR001906 GO:0010333|GO:0016829
Apr5g0012 561 Gene3D - 70 234 IPR036965 GO:0010333|GO:0016829
Apr5g0012 561 Coils Coil 352 372 - -
Apr5g0012 561 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 559 IPR034741 -
Apr5g0012 561 Pfam Terpene synthase family, metal binding domain 239 504 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr5g0012 561 CDD Terpene_cyclase_plant_C1 21 558 IPR044814 GO:0010333|GO:0016102
Apr5g0012 561 Gene3D Farnesyl Diphosphate Synthase 28 549 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0012 Apr-Chr5 94128 98557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0012 K15803 - aprc:113865171 1139.79