Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0009 ATGGAGGAAGCACTGAAGATAGGGAAATGCAATGGTGAAGTTGCTCCTTCTGCCAAATACTGCGTTACAGGGGCCACAGGGTATATTGGTTCATGGCTGGTTGAGGCTCTTCTTGAAAGAGGCTGCACGGTTCATGCTACTGTAAGAGATCCTGCAAAGTCATTGCACCTCCTTTCATTGTGGAAAGGTGGTGACAAATTGAGATTTTTCCAAGCAGATTTACATGAAGAAGGAAGCTTCGATGAGGCTGTAAAGGGATGTGATGGTGTGTTTCATGTAGCTGCTTCAATGGAATTCAATGTTAGTGAGAAAGAAAACACTGAGGCCTTTGTGCAAGAAAATATCATTGCACCTGCAATCAAAGGAACCATAAACCTTCTCAAGTCTTGTTTGAAATCCAATTCTGTGAAAAGGGTTGTTTTTACATCTTCCATAAGTACCATTACTGCCAAGGACAGTAATGGGAAGTGGAAGCCTATTGTTGATGAATCTTGCCAAATCCATCCAGATAATGTGTGGAATACTAAAACAAGTGGATGGGTTTATGCACTTTCAAAGCTTCTCACAGAAGAAGCGGCAGTTAAATTTGCAAAGGAGAATGGCCTTGATCTTGTGTCAGTCATAACAAGCACTGTTGCAGGCCCCTTCTTCACTTCTAATGTACCAACAAGTGTTAAAGTTCTATTGTCACCATTAACAGGTGAAACTGAATACTTCAAGATATTATCTGCTGTGAATGCACGAATGGGATCAATTGCTTTAGTTCACATTGAAGATATATGCAGTGCCCACATATTCCTAATGGAGCAAACCAAAGCAGAAGGTCGATACATATGTAGTAGCCAAAGTTGTACATTGTCAAACTTGGCTACTCTTCTTACCAAAGAGTATTCTTGTTCAAATTTGAAAAGGAAGACCAAGAAAAATTATGACCAAGTTCCTTCTGAGATTTCATCAAAGAAGCTAAACGATTTGGGTTTTAGTTACAAGCATGACCTTGAAGATATAGTTCATCAAACAATTACGTGCTGTCTAGATTATGGTTATTTACCTCCTGTTTAG 1062 0.3955 MEEALKIGKCNGEVAPSAKYCVTGATGYIGSWLVEALLERGCTVHATVRDPAKSLHLLSLWKGGDKLRFFQADLHEEGSFDEAVKGCDGVFHVAASMEFNVSEKENTEAFVQENIIAPAIKGTINLLKSCLKSNSVKRVVFTSSISTITAKDSNGKWKPIVDESCQIHPDNVWNTKTSGWVYALSKLLTEEAAVKFAKENGLDLVSVITSTVAGPFFTSNVPTSVKVLLSPLTGETEYFKILSAVNARMGSIALVHIEDICSAHIFLMEQTKAEGRYICSSQSCTLSNLATLLTKEYSCSNLKRKTKKNYDQVPSEISSKKLNDLGFSYKHDLEDIVHQTITCCLDYGYLPPV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0009 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 350 IPR036291 -
Apr5g0009 353 CDD FR_SDR_e 20 327 - -
Apr5g0009 353 Pfam NAD dependent epimerase/dehydratase family 21 273 IPR001509 -
Apr5g0009 353 Gene3D - 15 353 - -
Apr5g0009 353 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 17 341 - -
Apr5g0009 353 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 17 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0009 Apr-Chr5 62842 67105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0009 11 341 Miscellaneous Gene Families AT4G27250 58.284 2.26e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0009 - - gmx:100787267 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0009 5 62842 67105 Apr5g0009 5 62842 67105 ECH