Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr5g0004 | ATGGAAGGCCAACAGCTCAAAAGGTCCAAGGTTGTGAAAATTGACTCAAGAAAATCATGGGAACACCACATCACTGATGCCACAAAGAAAGGCAAACTTGTTCTGGTTCATTTCTCTGCTTACTGGTGCATGCCTTCTATAGCTATGAATCCTTTCCTTGAAGAATTGGCCTCTACCTATCAAAGTATTCTCTTTCTTAATGTAGATGTGGATGAGGTTAAGGAAGTTGCCTCCAAGTTGGAAATCAAAGCCATTCCCACCTTTTTGTTGATGAATGGAGGAGATCCAGTGAATAAAACCGTGGGTGCAAATCCAGACGAGATAAAGAAAAGGATCAATTATTATGTTCACCAAACACATTCCCAAAAGTCAATATGA | 378 | 0.3995 | MEGQQLKRSKVVKIDSRKSWEHHITDATKKGKLVLVHFSAYWCMPSIAMNPFLEELASTYQSILFLNVDVDEVKEVASKLEIKAIPTFLLMNGGDPVNKTVGANPDEIKKRINYYVHQTHSQKSI* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr5g0004 | 125 | ProSiteProfiles | Thioredoxin domain profile. | 1 | 117 | IPR013766 | - | |
| Apr5g0004 | 125 | Pfam | Thioredoxin | 14 | 112 | IPR013766 | - | |
| Apr5g0004 | 125 | PANTHER | THIOREDOXIN | 3 | 124 | - | - | |
| Apr5g0004 | 125 | PANTHER | MONODEHYDROASCORBATE REDUCTASE (NADH)-RELATED | 3 | 124 | - | - | |
| Apr5g0004 | 125 | SUPERFAMILY | Thioredoxin-like | 7 | 116 | IPR036249 | - | |
| Apr5g0004 | 125 | Gene3D | Glutaredoxin | 1 | 123 | - | - | |
| Apr5g0004 | 125 | CDD | TRX_family | 26 | 113 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr5g0004 | Apr-Chr5 | 24290 | 25738 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr5g0004 | K03671 | - | gmx:100500083 | 209.534 |
Event-related genes