Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2800 ATGGATCCACTTGTTTTCCATCTTCTTATTCTTCTTCTCACATCTCTTTTTAGTTGCCCATTTGTGGTCATTGCGCAATCTCCTAATATCTCACGGATCAGTGTAGTGGGAGTTGTTTATTGTGACACCTGCTCAAGCAGCAGTTTTTCTAAAGAGAGTTACTTCTTGCAAGGTGTTGAGGTTCACATACAGTGCAGATTTAGAGCAACCTCACCAAAAACCAGCGAGCAGATAAGCTTCTCAGTGAACAGAACCACAGACCAATATGGAGTGTACAAGTTGGAGATACCACCAGTGGATGGAGTTAATTGCATGGATGGTTCAGCAATTGTGTCAATGTGCCAAGCAAGCTTGATAAGGACCTCATCTCCCATTTGCAACGTTCCCTTTCTAAAGAGCACAACACGTGAGATATCGGTGAAATCAAAACAAGACAACTTGTGTGTGTACACCTTGAGTGCTTAGTACAAGCCACCTAAGAAGAACACTACCTTATGTGGTACAACTAGGAGCTCTTTCAACTCTTCAAAATTCTATTTCCCTTATCTTCCACCTTATGGATTCCCATGGCCACCCATTCCTCAGCTACCGTTGCCTCCTTTTCCATCATTACCAATCCCTCCCTTTCCCTCACTGCCATTCCCAACCTTACCACCATCTTTACCTTTTCCATTTCCACCACTCCCTTCATATCCTCCAACACCTTCTCCTCCATTCAAATTAGGAGACCCTACCACTTGGGTACCTCATATACCTTCTCTTTCTCATCTTTCTCCACCACCACCACCACCACCTGCTTTGAATTTAGGAGACCCTTCAACTTGGATCCCTCATTTTTCTCCGTCACCTCCTAATAATATACCCCAAAGCCAAAATCCGTAA 882 0.4376 MDPLVFHLLILLLTSLFSCPFVVIAQSPNISRISVVGVVYCDTCSSSSFSKESYFLQGVEVHIQCRFRATSPKTSEQISFSVNRTTDQYGVYKLEIPPVDGVNCMDGSAIVSMCQASLIRTSSPICNVPFLKSTTREISVKSKQDNLCVYTLSA*YKPPKKNTTLCGTTRSSFNSSKFYFPYLPPYGFPWPPIPQLPLPPFPSLPIPPFPSLPFPTLPPSLPFPFPPLPSYPPTPSPPFKLGDPTTWVPHIPSLSHLSPPPPPPPALNLGDPSTWIPHFSPSPPNNIPQSQNP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2800 292 MobiDBLite consensus disorder prediction 253 269 - -
Apr4g2800 292 Pfam Pollen protein Ole e 1 like 35 130 - -
Apr4g2800 292 PRINTS Proline rich extensin signature 194 215 - -
Apr4g2800 292 PRINTS Proline rich extensin signature 247 264 - -
Apr4g2800 292 PRINTS Proline rich extensin signature 271 292 - -
Apr4g2800 292 PRINTS Proline rich extensin signature 221 237 - -
Apr4g2800 292 PRINTS Proline rich extensin signature 151 163 - -
Apr4g2800 292 PANTHER OS09G0508200 PROTEIN 1 286 - -
Apr4g2800 292 PANTHER POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN 1 286 - -
Apr4g2800 292 MobiDBLite consensus disorder prediction 251 292 - -
Apr4g2800 292 MobiDBLite consensus disorder prediction 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2800 Apr-Chr4 36521979 36522935 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2800 - - aprc:113862612 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2800 4 36521979 36522935 Apr4g2800 4 36521979 36522935 ECH