Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2778 ATGGCCTCCGTTTCCAAACTCTCAACGCCAAATCCAACTCTTTCCTTATCAGAATCCCTTCGCCACAGATCTTCTCCAAAGTGCTTCCTCTCCTTCCAACCTTTCAACGCCAATTTCAAAACTAACCTCTCTGCATCGTCCCTCCCAACGCTTCACCCACACCATTCTAAAACCTCTTTGCGGATTAGATGCTCCCAAACAGATGGGAATGGAAGCACCGCAAAGAGGACAGTGCTTCATGATCTTTATGAGAAAGAAGGGCAGAGTCCATGGTATGATAATCTCTGCCGACCGGTCACGGATCTGCTTCCTCTTATAGCAAGTGGTGTTAGGGGTGTCACTAGCAACCCTGCGATCTTTCAGAAAGCTATCTCCTCCTCGAATGCTTACAATGATCAGTTCAGGGAACTTGTGCAAGCAGGGACAGACATTGAAAGTGCGTATTGGGAACTTGTAGTGAAGGATATTCAAGATGCTTGCAAACTATTTGAACCAATCTATGATCAAACAGATGGAGGTGATGGCTATGTTTCTGTTGAAGTATCTCCTAGGCTAGCTGATGACACTGAGGGAACCATAGAAGCTGCAAAATGGCTTCACAAAGTGGTTGATCGCCCCAATGTGTATATTAAGATTCCAGCTACTGCTGCATGTGTCCCTTCAATTAAGGAAGTTATTGCTAACGGGATAAGTGTGAATGTGACTCTGATATTCTCTCTTGCAAGATATGAAGCTGTAATTGATGCTTACTTGGATGGTCTTGAGGCATCTGGGTTAAGTGACCTCTCTAGAGTTACAAGTGTTGCCTCTTTCTTTGTCAGTCGAGTGGACACTCTCATTGACAAGATCCTCGAGAAAACTGGCACCCCCGAGGCCCTTAATCTACGTGGGAAGGCAGCAGTAGCACAAGCAGCCCTGGCTTACCAGCTCTACCAAAGGAAATTCTCTGGTCCAAGGTGGGAAGCTCTAGTTAAAAAAGGGGCCAAGAAGCAAAGGCTCCTCTGGGCCTCGACCAGCGTCAAGAACCCTGCCTATCCTGACACATTATATGTTGCTCCTCTTATTGGACCTGACACTGTATCCACCATGCCAGACCAAGCCCTTCAAGCATTTATTAATCATGGTACCGTATCCAGGACAATAGACTCAAATGAATCGGAAGCTGAAGGAATATACAATGCTCTCCAGAAATTAGGTGTTGACTGGGGTTTTGTGGGTTCTCAGCTTGAAATTGAAGGAGTGGAATCGTTTAAGAAAAGTTTTGACAGCCTCCTGGATTCCCTGCAAGAGAAGGCAAACTCTCTTAAGTTGGTCAGCCACTGA 1323 0.4588 MASVSKLSTPNPTLSLSESLRHRSSPKCFLSFQPFNANFKTNLSASSLPTLHPHHSKTSLRIRCSQTDGNGSTAKRTVLHDLYEKEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQAGTDIESAYWELVVKDIQDACKLFEPIYDQTDGGDGYVSVEVSPRLADDTEGTIEAAKWLHKVVDRPNVYIKIPATAACVPSIKEVIANGISVNVTLIFSLARYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKILEKTGTPEALNLRGKAAVAQAALAYQLYQRKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFINHGTVSRTIDSNESEAEGIYNALQKLGVDWGFVGSQLEIEGVESFKKSFDSLLDSLQEKANSLKLVSH* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2778 440 Gene3D Aldolase class I 77 432 IPR013785 -
Apr4g2778 440 PANTHER BNAA08G02750D PROTEIN 1 440 - -
Apr4g2778 440 TIGRFAM tal_mycobact: transaldolase 89 426 IPR004732 GO:0004801|GO:0005737|GO:0006098
Apr4g2778 440 Hamap Transaldolase [tal]. 79 438 IPR004732 GO:0004801|GO:0005737|GO:0006098
Apr4g2778 440 PANTHER TRANSALDOLASE 1 440 IPR001585 GO:0005975
Apr4g2778 440 ProSitePatterns Transaldolase signature 1. 112 120 IPR018225 GO:0005975
Apr4g2778 440 Pfam Transaldolase/Fructose-6-phosphate aldolase 105 427 IPR001585 GO:0005975
Apr4g2778 440 PIRSF Trnald_Bac_Plnt 68 440 IPR004732 GO:0004801|GO:0005737|GO:0006098
Apr4g2778 440 SUPERFAMILY Aldolase 85 431 - -
Apr4g2778 440 CDD Transaldolase_like 89 423 IPR004732 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2778 Apr-Chr4 36316874 36320865 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2778 K00616 - gmx:100807267 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2778 4 36316874 36320865 Apr4g2778 4 36316874 36320865 ECH