Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2658 ATGGCCACGCTTTACTCAACGCATTGTCATTCATTCGCATCTTCACCCTCTTCTTCCTCCTCCTCGCAACCGTGTCCTTTGTCGTCTAATCTTGCTTATCTTCAACGCGTGACCTTCTCTCAGCGTTTTCTCGCTGCCAAGGTTTCTCTGAAATCTCAACCCCAATCGCATCAGACTCCTGTACTCACCCAGCAACAAGAAGTTATGTGCAGATGGCATGTGAATGTAGGTACAGTAGAAGCTGCTGTTACACCTGTTGAAAATGGCACTTCTCATAAGCAGTTGAAAGCTGAATTGTTGTCTGTTACGACTCCGGAAGAGTCTCAAGGTGAAGTAAGTTTTGAAAAGGATGGAAATGAGTCCAGTGTTAGTATTACTGTTGTTGGAGCCTCTGGAGACCTTGCTAAGAAGAAGATTTTTCCGGCCCTCTTTGCGCTTTACTATGAGGATTGTCTCCCTAAGCATTTCACCATCTATGGTTATGCGCGGAGTAAGATGACTGATGCAGAATTGAGAATTATGGTTAGCAAGACCCTCACTTGTAGAATTGATAAGAGAGAGAACTGTAGTGAAAAGATGGAGCAATTTCTTAAAAGATGTTTCTACCATTCTGGACAATATGATTCTCAGGAAAACTTTGCAGCACTAGACAAAAAGCTGAAGGGACATGAGGGTGGGAGAACTTCTAATCGCCTGTTTTATCTTTCAATTCCTCCTAATATATTCATAGATGCTGTAAAATGTGCAAGCTTGTCAGCTTCTTCTGGTAATGGATGGACCAGGGTCATTGTTGAAAAGCCTTTTGGTCGTGATTCAGATTCTTCAGCTGCATTAACAAAATCACTCAAGCAGTATCTGACAGAAGATCAAATTTTCAGGATCGACCACTATCTTGGAAAAGAGCTTGTGGAAAATCTTTCTGTTCTCCGATTCTCAAATCTCATTTTCGAACCGTTATGGTCGAGGCAGTATATAAGAAATGTACAGTTGATATTCTCAGAAGATTTTGGCACTGAAGGACGTGGCGGGTACTTTGACCATTATGGCATAATACGAGACATTATGCAGAATCATTTACTTCAGATATTAGCCCTCTTTGCTATGGAAACCCCTGTTAGTTTGGATGCGGAGGATATTAGAAATGAAAAGGTCAAAGTTCTTCGTTCAATGAGACCCCTGCAACTTGAGGATGTGGTTATAGGTCAGTATAAGAGCCACACAAGAGGAGGCGTTACATATCCAGCCTATGTCGATGACAAAACTGTACCAAAAGACAGTTTAACTCCAACATTTGCTGCAGCTGCCCTCTTCATAGATAATGCAAGATGGGATGGAGTACCTTTTCTGATGAAGGCTGGGAAAGCATTACACAACAAGAGAGCTGAGATACGGGTACAGTTCAGGCATGTGCCAGGCAATTTGTACAACCGAAATTTTGGGACTGATCTTGATCGAGCTACAAATGAACTTGTTATAAGAGTTCAGCCTGATGAAGCTATTTATTTGAAGATAAACAACAAAGTACCTGGTCTGGGAATGAAGTTGGACCGCAGTAATCTAAATCTTCACTATGCAGCAAGATATTCAAAGGAGATTCCAGATGCTTATGAGAGGCTACTTCTGGATGCCATTGAAGGAGAAAGAAGACTCTTTATACGTAGTGATGAACTGGATGCTGCTTGGTCACTCTTTACACCTGTACTGAATGAGCTAGAAGACAAAAAGATAATTCCAGAGTACTATCCTTATGGTAGTAGAGGTCCTGTTGGTGCTCACTATCTTGCAGCCAGATACAACGTACGGTGGGGTGACCTTGGGACTGACATAGACCAATAA 1836 0.4199 MATLYSTHCHSFASSPSSSSSSQPCPLSSNLAYLQRVTFSQRFLAAKVSLKSQPQSHQTPVLTQQQEVMCRWHVNVGTVEAAVTPVENGTSHKQLKAELLSVTTPEESQGEVSFEKDGNESSVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIYGYARSKMTDAELRIMVSKTLTCRIDKRENCSEKMEQFLKRCFYHSGQYDSQENFAALDKKLKGHEGGRTSNRLFYLSIPPNIFIDAVKCASLSASSGNGWTRVIVEKPFGRDSDSSAALTKSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLEDVVIGQYKSHTRGGVTYPAYVDDKTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHNKRAEIRVQFRHVPGNLYNRNFGTDLDRATNELVIRVQPDEAIYLKINNKVPGLGMKLDRSNLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLNELEDKKIIPEYYPYGSRGPVGAHYLAARYNVRWGDLGTDIDQ* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2658 611 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 121 308 IPR036291 -
Apr4g2658 611 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 308 602 IPR022675 GO:0004345|GO:0006006|GO:0050661
Apr4g2658 611 Gene3D Dihydrodipicolinate Reductase; domain 2 294 603 - -
Apr4g2658 611 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 37 608 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 37 608 - -
Apr4g2658 611 PRINTS Glucose-6-phosphate dehydrogenase signature 261 274 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 PRINTS Glucose-6-phosphate dehydrogenase signature 285 313 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 PRINTS Glucose-6-phosphate dehydrogenase signature 337 354 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 PRINTS Glucose-6-phosphate dehydrogenase signature 355 371 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 PRINTS Glucose-6-phosphate dehydrogenase signature 442 468 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 123 603 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 127 305 IPR022674 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 122 604 IPR001282 GO:0006006|GO:0016614|GO:0050661
Apr4g2658 611 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 295 602 - -
Apr4g2658 611 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 295 301 IPR019796 GO:0004345|GO:0006006
Apr4g2658 611 Gene3D - 119 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2658 Apr-Chr4 35314624 35319026 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2658 K00036 - gmx:100793694 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2658 4 35314624 35319026 Apr4g2658 4 35314624 35319026 ECH
Apr4g2658 4 35314624 35319026 Apr6g0352 6 3961265 3966164 PCT