Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2203 ATGTGGAAGTTTTTGCGATTCGCCGCTTCCCCATCACGTCGATTCTCGACGGCGATTCCCGGTCCGTGCATGGTTCACAAGCGCGGCACTGATATCCTCCACGATCCTTGGTTCAACAAGGATACTGGCTTTCCTTTGACTGAAAGGGATCGATTGGGGCTTAGGGGCCTCCTTCCTCCTCGTGTCATTTCATTTGAACAGCAATATGATCGTTTTATGAATTCATATAGATCTTTGGAGAAGAATACTCGGGGCCAATCAGATAAAATTGTTTCCTTAGCGAAATGGAGGATCTTAAATAGACTGCATGACAGGAATGAGACTCTGTACTACAGAGTTCTTATAGATAATATCAAAGAGTTTGCTCCAATAATCTATACTCCTACAGTTGGGTTAGTGTGTGAAAATTATTCAGGGTTATATAGGCGCCCACGCGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCAGCTCATCAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGCCTGGGTGACCTTGGAGTTCAGGGCATTGGAATACCTATAGGAAAACTGGACATGTATGTTGCTGCTGCTGGAATCAACCCACAAAGAATACTTCCAGTTATGTTAGATGTTGGCACAAACAATCAAAAGCTACTCGAAGATCGCCTTTATTTGGGAGTTCGACAACCCAGGTTGGAAGGTGAAGAATATCTATCGATTGTGGATGAATTCATGGAAGCTGTTTATGCTCGATGGCCTAAGGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCCTTTGAAACCCTGAAACGTTATCGAGAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACAGCTGGTGTTGCACTTGCTGGACTATTGGGAACTGTGAGAGCCCAAGGTCAATCATTGTCTGATTTTGTGAAACAAAAGATAGTGGTGGTTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTGACATGGCTGTCCAGGCAGTTTCAAGGATGACAGGGTGTAGTGGAACAGCTGCCAAAAGTCAGTTTTTTTTAATTGATAAAAATGGTCTTGTCACAACGGAAAGGAGCAATCTAGATCCAGCTGCAATTCCATTTGCCAAAAATCCAAGAGACCTTGAAGAGCTTACAGAGGGAGCTAGTATAGTTGAAGTGGTTAAGAAGGTTAAGCCACATGTTCTCCTTGGATTGTCTGGCGTTGGTGGTGTTTTCAATGAGGAGGTGCTTAAGGCAATGAGAGAGTCTGTTTCAACAAAACCAGCTATCTTTGCCATGTCTAATCCCACCATGAATGCTGAGTGCACTGCTACTGAAGCTTTCAGTCATACTGGAGAAAATATAGTATTTGCAAGTGGAAGCCCTTTTGAAAATGTAGATCTTGGAAATGGAAATGTTGGCCATGTAAATCAAGCCAACAACATGTACCTGTTCCCGGGGATCGGTTTGGGAACACTGCTATCAGGTGCTCGTCATATAACGGATGGAATGTTGCAGGCAGCATCTGAATGCCTTGCTTCATACATGACAGATGAAGATATCCAAAAGGGAATCTTGTATCCATCCATTGACTGTATACGACATGTCACAGCAGAGGTGGGGGCTGCTGTTATACGGGCAGCAGTTGCAGAAAAGCAGGCCGAAGGACGTGGTGATGTAGGGTTCAAAGAACTTAGCCACATGTCAAAAGAGGATACTGTGGAGTATGTCAGGGGCAATATGTGGTACCCTGAGTATTGCCCCCTTGTTCATGAAAAATAA 1803 0.4393 MWKFLRFAASPSRRFSTAIPGPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYDRFMNSYRSLEKNTRGQSDKIVSLAKWRILNRLHDRNETLYYRVLIDNIKEFAPIIYTPTVGLVCENYSGLYRRPRGMYFSAKDKGEMMSMIYNWPAHQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGVRQPRLEGEEYLSIVDEFMEAVYARWPKAIVQFEDFQMKWAFETLKRYRERFCMFNDDIQGTAGVALAGLLGTVRAQGQSLSDFVKQKIVVVGAGSAGLGVLDMAVQAVSRMTGCSGTAAKSQFFLIDKNGLVTTERSNLDPAAIPFAKNPRDLEELTEGASIVEVVKKVKPHVLLGLSGVGGVFNEEVLKAMRESVSTKPAIFAMSNPTMNAECTATEAFSHTGENIVFASGSPFENVDLGNGNVGHVNQANNMYLFPGIGLGTLLSGARHITDGMLQAASECLASYMTDEDIQKGILYPSIDCIRHVTAEVGAAVIRAAVAEKQAEGRGDVGFKELSHMSKEDTVEYVRGNMWYPEYCPLVHEK* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2203 600 Gene3D - 27 290 IPR037062 GO:0004471
Apr4g2203 600 SMART malic_2 103 283 IPR012301 GO:0004471
Apr4g2203 600 Pfam Malic enzyme, N-terminal domain 103 283 IPR012301 GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 109 133 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 169 198 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 205 227 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 264 282 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 289 305 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 323 339 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PRINTS Malic enzyme signature 432 448 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PIRSF ME 8 599 IPR001891 GO:0004470|GO:0004471
Apr4g2203 600 PANTHER MALIC ENZYME-RELATED 8 596 - -
Apr4g2203 600 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 293 597 IPR036291 -
Apr4g2203 600 SMART Malic_M_2 293 556 IPR012302 GO:0051287
Apr4g2203 600 PANTHER MALIC ENZYME 8 596 - -
Apr4g2203 600 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 15 292 IPR046346 -
Apr4g2203 600 Pfam Malic enzyme, NAD binding domain 293 555 IPR012302 GO:0051287
Apr4g2203 600 ProSitePatterns Malic enzymes signature. 289 305 IPR015884 GO:0004471
Apr4g2203 600 Gene3D - 291 600 - -
Apr4g2203 600 CDD NAD_bind_1_malic_enz 293 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2203 Apr-Chr4 31106046 31112945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2203 K00028 - gmx:100795823 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2203 4 31106046 31112945 Apr4g2203 4 31106046 31112945 ECH
Apr4g2203 4 31106046 31112945 Apr10g1372 10 25971080 25978897 PCT