Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2088 ATGTTTACTAAATTCCTCATCTTCTTTCTCCTTTGCAATCCCTTTGTTTCTTTGATCACAGCACATGAATACCCTGATGATGATTTCGTGCGTCCATTGGACAGAAAACTGTTGGGTTTGGATCAAAAGCAAGAAAAGCTGAGCCATTTCAAGTTCTATTGGCATGACATAGTGAGTGGACGCAACCCTTCTTCAGTTGAAGTTGTTCCTCCACCCTTGAAGAACTCAACCACAGCTTTTGGTTTGGTGAACATGATTGAGAACCCTTTGACTTTGGGACCCCAATTGAGTTCCAAATTGGTGGGAAAAGCACAAGGGTTCTATGCTTCCACATCGCAGAGTGAAGTGGACTTGATCATGGCTATGAATTTTGCAATAACTGAAGGGAAGTACAATGGTAGCACCATCACAATTTTGGGGAGGAACCCTGTTTTCAACAAGGTGAGGGAGATGCCTGTGATTGGTGGTAGTGGACTTTTTCGATTTGCTAGGGGATATGCTCAACTTAGAACTCACTGGTTCTCACCTAAGACTAAAGATGCTATTGTTGAGTACAATATTTATGTTTTTCATTATTGA 579 0.4145 MFTKFLIFFLLCNPFVSLITAHEYPDDDFVRPLDRKLLGLDQKQEKLSHFKFYWHDIVSGRNPSSVEVVPPPLKNSTTAFGLVNMIENPLTLGPQLSSKLVGKAQGFYASTSQSEVDLIMAMNFAITEGKYNGSTITILGRNPVFNKVREMPVIGGSGLFRFARGYAQLRTHWFSPKTKDAIVEYNIYVFHY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2088 192 Pfam Dirigent-like protein 48 190 IPR004265 -
Apr4g2088 192 Gene3D - 38 189 IPR044859 -
Apr4g2088 192 PANTHER NUCLEOPORIN-RELATED 1 191 IPR004265 -
Apr4g2088 192 PANTHER DIRIGENT PROTEIN 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2088 Apr-Chr4 29768207 29768821 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2088 - - gmx:100796078 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2088 4 29768207 29768821 Apr10g0802 10 20018139 20018717 PCT
Apr10g0801 10 19999838 20000401 Apr4g2088 4 29768207 29768821 PCT