Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1951 ATGGAGAAGTTGAGTGTGGAAGTAAAACCTGAAGAGGGTGATGAGATGAAATGGGTTAATGATTCTTCAGTGGATCACAAAGGCAGGGTTCCACTCAGAGCTTCAACTGGTTCTTGGAAAGCATCTCTCTTTATTATTGGAATTGAGACAAGCGAGAGGTTGAGCTACTTTGGAATAGCAACAAGCTTGGTCCTATACCTCACAAAGGTTATGCATCAAGATCTCAAAACTGCAGCAAGGAATGTGAACTACTGGTCTGGTGTCACTACTTTGATGCCATTGTTTGGGGGATTCATAGCCGATGCATACATGGGCCGTTACTCCACTGTGTTTGCATCAAGCATTGTTTATCTCATAGGATTGGTTCTCCTTACTCTATCTTGGTTCTTACCAGGCTTAAAGCCGTGTGATCATACAGCCATGTGCAATGAACCAAGGAGAATTCATGAAGTGGTTTTCTTCTTGGCCATTTACTTAATATCTATTGGAACAGCAGGGCACAAACCCTCTTTAGAGAGCTTTGGAGCTGATCAATTTGATGAGGATCATGTTGAAGAACGGATGCAAAAAATGTCATTTTTCAATTGGTGGAATTGTGCACTCTGCAGTGGTCTTATTCTGGGAGTGACCCTTATTGTTTACATACAAGACAACATAAACTGGGGAGTTGCTGATATTATCTTCACTGTGGTCATGGCTCTCTCATTACTCATCTTCATTATAGGAAGGCCATTTTATCGTTATAGGGTACCAACTGGGAGTCCCTTGACTCCAATGTTGCAGGTTCTTGTTGCTGCCATTTCCAAAAGAAAGCTTCCTTACCCTTCTAATCCTGCCCAATTGTATGAGGTCCCCAAGACTCTTAGCAACAATACAAGATTTCTTTGCCACACTAATAAACTCAAATTTCTTGACAAGGCAGCAATTGTTGTTGATGATGGGAATTCAGCAGAGAAGCAGAGTCCATGGAATCTAGCAACCGTAACCAAGGTTGAAGAAATGAAGCTTATTATCAATATGATCCCCATTTGGGTATCTACCATACCATTCGGTATATGTGTGGCACAGACATCTACATTCTTTATCAAACAAGGTGCTACATTGAACAGGAAGATTGGTAATGGGTTTGAGATTCCTCCAGCTTCAATCTTCACAGTTGCAGCCTTTGGGATGATACTTTCTGTGGCCATATATGACAAGATTCTTGTACCTGTGTTAAGAAGGCTAACTGAAAATGAGAGAGGAATCAACATCCTTCAGAGGATTGGTTTTGGAATGCTTTTCTCTATTACTACAATGATAGTAGCAGCTTTTATAGAGAAAAAAAGGCTTGAAGCTGTTGAGAGGGATCCAATGAAGGGTTCATTAACAATGAGTGTCTTTTGGTTGGCACCACAATTTCTTATTATTGGTTTTGGTGATGGGTTTACACTAGTGGGTTTGCAAGAGTATTTCTATGACCAGGTACCAGACTCTATGAGAAGCTTAGGCATAGCATTTTACCTAAGTGTTATTGGGGCAGCAAATTTCCTAAGTAGTATGTTGATAACAATTGTTGATCATATAACAGAGAAGAGCGGGAAGAGTTGGTTTGGTCAGGATTTGAATAGTAGTCGCTTGGACAAGTTCTATTGGCTATTGGCAGCAATAACCACAACCAATTTGTTCTTCTTTGTGTTTTTTGCCCGAAGATATTCCTACAAAAATGTGCAAAAGGTGGCAGTAGCTGATTGCTATGAAGTCAAAAGTGATTGTGGTGGTGTAGAAAATAAAGTTTAA 1779 0.4025 MEKLSVEVKPEEGDEMKWVNDSSVDHKGRVPLRASTGSWKASLFIIGIETSERLSYFGIATSLVLYLTKVMHQDLKTAARNVNYWSGVTTLMPLFGGFIADAYMGRYSTVFASSIVYLIGLVLLTLSWFLPGLKPCDHTAMCNEPRRIHEVVFFLAIYLISIGTAGHKPSLESFGADQFDEDHVEERMQKMSFFNWWNCALCSGLILGVTLIVYIQDNINWGVADIIFTVVMALSLLIFIIGRPFYRYRVPTGSPLTPMLQVLVAAISKRKLPYPSNPAQLYEVPKTLSNNTRFLCHTNKLKFLDKAAIVVDDGNSAEKQSPWNLATVTKVEEMKLIINMIPIWVSTIPFGICVAQTSTFFIKQGATLNRKIGNGFEIPPASIFTVAAFGMILSVAIYDKILVPVLRRLTENERGINILQRIGFGMLFSITTMIVAAFIEKKRLEAVERDPMKGSLTMSVFWLAPQFLIIGFGDGFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAANFLSSMLITIVDHITEKSGKSWFGQDLNSSRLDKFYWLLAAITTTNLFFFVFFARRYSYKNVQKVAVADCYEVKSDCGGVENKV* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1951 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 582 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr4g1951 592 CDD MFS_NPF5 39 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Apr4g1951 592 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 96 120 IPR018456 GO:0006857|GO:0016020|GO:0022857
Apr4g1951 592 Gene3D MFS general substrate transporter like domains 11 574 IPR036259 -
Apr4g1951 592 SUPERFAMILY MFS general substrate transporter 35 569 IPR036259 -
Apr4g1951 592 Pfam POT family 107 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr4g1951 592 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 21 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1951 Apr-Chr4 27784572 27790624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1951 1 590 Organic Solute Cotransporters AT3G53960 62.040 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1951 - - gmx:100801757 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1951 4 27784572 27790624 Apr4g1951 4 27784572 27790624 ECH
Apr4g1951 4 27784572 27790624 Apr10g0649 10 15509447 15516074 PCT