Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1653 ATGGCTTCCTCTGCAGCAGATGATAAACCAAGATCTGTGAAAAGAGTGGCTGTGGTTGGTGCTGGGGTAAGTGGGCTTGCTGCAGCCTACAAATTGAAATCACATGGTCTGGATGTCACTGTATTTGAATCTGAAGGAAGAGCTGGAGGGAGGTTAAGAAGTGTTTCTCAGGATGGACTCGTTTGGGATGAGGGAGCTAATACAATGACTGAAAGTGAAGTGGAGGTTAAAGGTTTGATTGATGCTCTTGGACTTCAAGACAAGCAACAATATCCAATTTCACAGCATAAGCGCTATATTGTGAAAAATGGGACACCACTTCTGGTACCCACAAATCCTGCTGCACTCCTGAAGAGCAAACTCCTTTCTGCACGATCAAAGATCCAGATCATTTTTGAACCATTTATGTGGAAAAGAAGGGACCCCTCAAATTTGTGTGATGAAAATTCTGAGGAAAGTGTTGGTGGGTTCTTTGAACGTCATTTTGGGAAAGAGGTTGTGGACTATCTGATTAATCCTTTTGTTGGAGGCACTAGTGCATCAGATCCTGAATCTCTTTCAATGTGCCATTTTTTTCCAGAGCTATGGGATTTGGAGAAAAGGTTTGGCTCCATTATAGCTGGGGCTTTGCAATCCAAGTTTGCCAAAAAGGACAAAACTGGAGTGAATAGGAGTGCGCCAAGAAAAAACAAAAACAAGGGTGGTTCATTTTCTTTCAATGGTGGGATGCAGACACTAACTGATACATTGTGCAAAGAGATTGGCAAAGATGACCTTAAACTAAGTGCAAAGGTTTTGACATTAGCTTACAGTCATGATGGAAGTTCCTCATCGCAAACCTGGTCTATAACTTGTACTTCTAACCAAAACACACAAGATATTGATGCAATAATTATGACGGCTCCCATGTGTAATGTCAAGGACATCAAGATCACAAAAAAAGGAACCCCATTTCCTCTTAATTTTCTTCCTGAGGTGACCTATGTGCCACTCTCTGTCATGATTACTACCTTTAAAAAGGAGAATGTGAAGAGACCTCTGGAGGGATTTGGAGTTCTTGTTCCTTCAAAAGAGCGACAAAATGGTTTAAAAACCCTTGGTACCCTTTTTTCCTCTATGATGTTTCCAGATCGTGCACCTAGTGATTTATATCTCTATACCACCTTCATTGGGGGAACTCAAAACAGGGAATTGGCTCAAGCTTCAACTGAGGAGCTTAAGAAAATTGTTACTTCTGACCTGAGAAAGTTGTTGGGAGCAGAGGGGGAGCCTACATTTGTCAACCATTTCTTTTGGAGTAAAGGCTTTCCTTTGTACGGACGTAACTATGGGTCAGTTCTTGAAGCAATTGATAAGATGGAAAGAGATCTTCCCGGGTTTTTCTATGCAGTTGGCAAAGCAATTGCCTCAGGTTGCAAAGCAGCTGATCTTGTAATTTCTTACCTCAACTCTGCTTCAGACAACACAGTGCCTGGTAAGTGA 1482 0.4184 MASSAADDKPRSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFESEGRAGGRLRSVSQDGLVWDEGANTMTESEVEVKGLIDALGLQDKQQYPISQHKRYIVKNGTPLLVPTNPAALLKSKLLSARSKIQIIFEPFMWKRRDPSNLCDENSEESVGGFFERHFGKEVVDYLINPFVGGTSASDPESLSMCHFFPELWDLEKRFGSIIAGALQSKFAKKDKTGVNRSAPRKNKNKGGSFSFNGGMQTLTDTLCKEIGKDDLKLSAKVLTLAYSHDGSSSSQTWSITCTSNQNTQDIDAIIMTAPMCNVKDIKITKKGTPFPLNFLPEVTYVPLSVMITTFKKENVKRPLEGFGVLVPSKERQNGLKTLGTLFSSMMFPDRAPSDLYLYTTFIGGTQNRELAQASTEELKKIVTSDLRKLLGAEGEPTFVNHFFWSKGFPLYGRNYGSVLEAIDKMERDLPGFFYAVGKAIASGCKAADLVISYLNSASDNTVPGK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1653 493 Pfam Flavin containing amine oxidoreductase 23 479 IPR002937 GO:0016491
Apr4g1653 493 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 482 - -
Apr4g1653 493 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 439 - -
Apr4g1653 493 Gene3D protoporphyrinogen ix oxidase, domain 3 109 215 - -
Apr4g1653 493 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 482 - -
Apr4g1653 493 SUPERFAMILY FAD/NAD(P)-binding domain 14 482 IPR036188 -
Apr4g1653 493 PRINTS Adrenodoxin reductase family signature 15 37 - -
Apr4g1653 493 PRINTS Adrenodoxin reductase family signature 38 51 - -
Apr4g1653 493 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 437 - -
Apr4g1653 493 Gene3D - 15 475 IPR036188 -
Apr4g1653 493 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 14 480 IPR004572 GO:0004729|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1653 Apr-Chr4 19384791 19399498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1653 K00231 - gmx:547941 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1653 4 19384791 19399498 Apr4g1653 4 19384791 19399498 ECH