Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1647 ATGTTTCCTTTCCTTTCCCCCTTTTCCCTCTATTTTGTGCAGGCATTTTGTCCCCAATTAACTATTGGCGCTCCAGTCATTGAAAGTTTGAGAAAACACACCAGGGCTTATCTCGATTTTCACCTTATGGTTACAAATCCTCTTGATTATGTTGAACCTTTGGCAAAACTGTGCTTCTGGTTTACATTTCATAAAGAGGCACCAACAATGAAAGAACTTATCCACAGAATTAAGTCACAGGGCATGAGGCCTAGTGTAGCATTAAAGCCTGGGACACCCATAGGTGAGGTTTATCCTTTGGTATGCATTTTTCCCACTCTCTGAAAATCTTGGGAAATGGTTCTTGTAATGACTGTAGATCCTGGATTTGCAGGACAAAAATTTATGCCAGAGATGATGGATAAGGTACGTATACTGAGGAAGAAGTATCCATCCCTTGACATAGAGGTTGATGGTAGTTTGGGGCCTTCAACCATTGACGTAGCTTCATCAGCAGGGGCAAACTGCATTGTTGCTGGAAATTCAGTGTTCAGAGCTCCTGAGCCAGCTCAAGTAATATCCTTACTGAGGAATTCTGTTGAGAAAGCCCATCAAACATATTGA 603 0.4179 MFPFLSPFSLYFVQAFCPQLTIGAPVIESLRKHTRAYLDFHLMVTNPLDYVEPLAKLCFWFTFHKEAPTMKELIHRIKSQGMRPSVALKPGTPIGEVYPLVCIFPTL*KSWEMVLVMTVDPGFAGQKFMPEMMDKVRILRKKYPSLDIEVDGSLGPSTIDVASSAGANCIVAGNSVFRAPEPAQVISLLRNSVEKAHQTY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1647 199 Gene3D Aldolase class I 12 198 IPR013785 -
Apr4g1647 199 CDD RPE 16 189 IPR000056 GO:0005975|GO:0016857
Apr4g1647 199 SUPERFAMILY Ribulose-phoshate binding barrel 15 194 IPR011060 -
Apr4g1647 199 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 15 197 - -
Apr4g1647 199 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 15 197 IPR000056 GO:0005975|GO:0016857
Apr4g1647 199 Pfam Ribulose-phosphate 3 epimerase family 15 176 IPR000056 GO:0005975|GO:0016857
Apr4g1647 199 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 113 135 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1647 Apr-Chr4 19250673 19252613 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1647 K01783 - gmx:100500085 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1647 4 19250673 19252613 Apr4g1647 4 19250673 19252613 ECH