Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1638 ATGACCCTCCGTCTCGTCTCAGCTCCGCCGTCATTCTCTCTCTTCACCTGCCGCGCCACCTCCCCCACCGCCGTCCCTCTGCCTCCGCCTACTTCTTCAGTTCCACAGCCACCGCCGCTAACGTGCGCACTTCACTGCCCCCACTTCCAATCGTGCTCGGGGTGCACGCACGAGTTCAACCTCCACCGTCCGGTTATAATGGAGGACGCCACCGATTTCTTTCGGAAACACGGCGTCTCAGACTTCACATTTGACACTTGCAAACTGTGGGGTTGGAGGTGCCGTGCTAAATTGGCCGTGCGTGGCTCTTCGACCGACCCTCTCATTGGCCTCTATGAGGAGGGTTCTCATAACGTTGTTGACATTCCACTCTGCAAAGCACATCATCCTAATATTAATGCTGCTGTGGAGCTGGTTAGACAAGGTATTACTGAAATAGGTGTTGAGCCGTATATTGAAGATGAAGGTACAGGCGATTTGCGATACATCCAGATGGCTGTGACAACATACAACACATCTCTTCCTGCAGCAGAAAGATATAAGAATGGAAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAATGAAAATACTCCTGGTTCAGACAAATTGAATGCATTGGCAAATTTTCTATGGAAAAATGGTGGGCCACGGAGCAGGCTTCATTTAGTTCACTCTGTGTGGGCCAACTTTCAGACTTCTACTAACAATGCTTTTGATACCTTGCTTCGGAAGTTACAGAAGTATGTTCCACATGAATCATCTGTTGCTGATTTGTATGCTGGAACTGGGGTCATTGGGTTGTCATTAGCTGCCACAAGAAAATGCAGATCCATTAAATGCATTGAGATTAACAAAGAGTCAAAGGCATCTTTTGAGAAGACAATTGAACGTTTACCTGCCACTGTTGAAAGCAGTATTACTTGGCATCATGCAGATGCTTCAAAAGAACCTTTTTTGTGGCTTGTGGGGTCAGATGTTGTTGTCATTGATCCTCCCAGGAAAGGACTTGATGCATCTCTTATTGATGCATTGAAGAATATATCAGCAATCGAGCGTAAAGTTTTCTCATCATCTGAAAGCTCAAACTCAGCCCAAGAAGAGAAAAGACCATGGGTTTTACGTGCTAAAGAAGCTTCAGTCCAGATTGGAAGCAAACCATCTCCGGCCCGCATCCCTCAATCAGTGCCACAAACCCTTATTTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCTAGTAAGGCATGGTATTTGGAAAAAGCTCATGCCTTTAATTTCTTTCCTGGTACACAAAGCATTGAAGTTCTAGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAACAAGGAAAGAAAAAGAAAAAACACTTGCAAGGAGCTGTGAGACATTAA 1410 0.4525 MTLRLVSAPPSFSLFTCRATSPTAVPLPPPTSSVPQPPPLTCALHCPHFQSCSGCTHEFNLHRPVIMEDATDFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSTDPLIGLYEEGSHNVVDIPLCKAHHPNINAAVELVRQGITEIGVEPYIEDEGTGDLRYIQMAVTTYNTSLPAAERYKNGKVQVTLVWNSRNENTPGSDKLNALANFLWKNGGPRSRLHLVHSVWANFQTSTNNAFDTLLRKLQKYVPHESSVADLYAGTGVIGLSLAATRKCRSIKCIEINKESKASFEKTIERLPATVESSITWHHADASKEPFLWLVGSDVVVIDPPRKGLDASLIDALKNISAIERKVFSSSESSNSAQEEKRPWVLRAKEASVQIGSKPSPARIPQSVPQTLIYISCGWESFKEDCKSLLSSKAWYLEKAHAFNFFPGTQSIEVLAVFKRGPQKKKQGKKKKKHLQGAVRH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1638 469 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 50 449 IPR010280 GO:0006396|GO:0008173
Apr4g1638 469 Pfam Conserved hypothetical protein 95 245 371 - -
Apr4g1638 469 PANTHER BNAA06G32370D PROTEIN 238 449 - -
Apr4g1638 469 PANTHER BNAA06G32370D PROTEIN 31 238 - -
Apr4g1638 469 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 448 IPR029063 -
Apr4g1638 469 Gene3D Vaccinia Virus protein VP39 88 365 IPR029063 -
Apr4g1638 469 Gene3D Vaccinia Virus protein VP39 384 446 IPR029063 -
Apr4g1638 469 Gene3D - 93 231 - -
Apr4g1638 469 CDD AdoMet_MTases 256 348 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1638 - - gmx:100816889 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1638 4 19036742 19044377 Apr4g1638 4 19036742 19044377 ECH