Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1623 ATGCAAATGATTTGCGTTTGTGGTGATAAGCTATGCCGTTTTGACGCTCCTTCATTCTTCGGCTCTCGTGTGTCGTTTCCTAGCACCCATTTGTCGTTTGGTTTACCCAGAAGCCACAAGTCCCGCGTAGTATCCATGGGCACTAAGCGCAGCCCCAAGCGTCTCAAATACACTTCTGCTTCTCGCTTCACCAAGGAGGGTGGTTTGGTGTACATTGAAGCAAACCCATCTGCTTCTGATTCATGGAAATTGGAACCAGTTATCCATCTCTTGAAACAAGGTGCTGTTGGAGTTATTCCCACTGATACCCTGTATGCAATAGCATGTGACCTCAGAAGCAACTCAGCCATTGAACGTCTTCGTAGAATCAAGAATATAGAAGCTTCAAAGCCTCTTAGTATCTTGTGCCACTCATTTCGGGACATAGACAAGTACACAGCCGGATTTCCACGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGCTGTTAAGCATTACTTACCTGGTCCTTACACATTCATCCTAATTGCAAGCAAAGAATTACCTAAGCAGTGCATAAGGTTTGGGACTTCTGCTGCCAAATATGCATCACGAAAAAATGTGGGTGTCCGTATGCCTGATGATGCCATTTGTCAAGCAATACTGAAAGAGATGGATGCACCATTAATAAGTACAAGCATCAAGTTCCTGAAAGAAGATGAGTGGATGATTGATCCAGTTATGATAGCTGATACGTATGGACCTGAGGGTCTTGATTTTGTTGTTGATGGTGGTCTTAGAGTGGCCGAACCATCCACAGTGGTTGACATGACAAAAATGCCTCCCAAAGTACTACGACAAGGAAAGGGTCCTGTTTTACCTTGGATGGTATTGGAAGATGATCACAAAACTGATGTTGAAAAGGATCTCATCCCTGCTGGCATTTGA 930 0.4409 MQMICVCGDKLCRFDAPSFFGSRVSFPSTHLSFGLPRSHKSRVVSMGTKRSPKRLKYTSASRFTKEGGLVYIEANPSASDSWKLEPVIHLLKQGAVGVIPTDTLYAIACDLRSNSAIERLRRIKNIEASKPLSILCHSFRDIDKYTAGFPRGDGQGHANLFKAVKHYLPGPYTFILIASKELPKQCIRFGTSAAKYASRKNVGVRMPDDAICQAILKEMDAPLISTSIKFLKEDEWMIDPVMIADTYGPEGLDFVVDGGLRVAEPSTVVDMTKMPPKVLRQGKGPVLPWMVLEDDHKTDVEKDLIPAGI* 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1623 309 ProSiteProfiles YrdC-like domain profile. 81 284 IPR006070 GO:0003725
Apr4g1623 309 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 24 301 - -
Apr4g1623 309 Gene3D DHBP synthase 69 290 - -
Apr4g1623 309 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 80 284 IPR006070 GO:0003725
Apr4g1623 309 SUPERFAMILY YrdC/RibB 72 286 IPR017945 -
Apr4g1623 309 Pfam Telomere recombination 90 282 IPR006070 GO:0003725
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1623 - - gmx:100789682 547.74
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1623 4 18646021 18656015 Apr4g1623 4 18646021 18656015 ECH