Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1621 ATGCCTGCCATTCCCGAAGAACCCTTACTCGCTCCAAACCCAGATCGCTTCTGCATGTTCCCAATTCAATACCCTCAGATATGGGAAATGTACAAGAAAGCCGAAGCCTCCTTCTGGACTGCAGAAGAAGTTGACCTCTCCCAAGACCTCCGTCACTGGGACTCCCTCACCGACGGCGAACGCCACTTCATCACCCACGTCCTGGCCTTCTTCGCGGCCTCAGATGGCATCGTTTTGGAAAACCTCGCCGGACGCTTCATGAAAGAAATCCAAGTCTCCGAGGCACGCGCCTTCTACGGCTTCCAAATCGCCATCGAAAACATTCACTCCGAAATGTATAGCCTCCTCCTCGAAACCTACATAAAAAACTCCGAAGAGAAAAACCGCTTGTTCCACGCCATTGACACCGTTCCTTGCGTCAAGAAGAAAGCCGAGTGGGCCCTACGCTGGATCGACGCCTCCGATTCCTTCGCCGAACGACTCGTCGCATTCGCGTGCGTCGAAGGGATATTCTTCTCTGGAAGCTTCTGCGCCATTTTTTGGCTCAAGAAGCGCGGGTTAATGCCTGGTCTAACCTTTTCGAACGAGCTTATTTCACGCGACGAGGGGCTTCATTGTGATTTCGCGTGCTTGCTGTATTCTTTGATGAGGAAGAAGCTGAGTGAGGAGCGCGTGAGGGAGATCGTGCGTGATGCGGTGGAGATAGAGAGGGAGTTTGTGTGCGACGCGCTTCCCTGTGCGTTGGTGGGAATGAATGGGGATTTGATGAGTCAGTATATTGAGTTTGTGGCGGATAGGTTGTTGGATGCACTTGGGTGTGGGAAGGTGTATAATGTGCAGAACCCGTTTGATTGGATGGAGCTGATTTCGCTGCAGGGCAAAACTAACTTTTTTGAGAAGCGCGTTGGGGAGTATCAGAAGGCTTCCGTTATGTCGAGTTTAAACGGCAATGGTGGGGCCCACGTGTTCAAGATGGATGAAGACTTCTAA 990 0.5172 MPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSEEKNRLFHAIDTVPCVKKKAEWALRWIDASDSFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEERVREIVRDAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLDALGCGKVYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHVFKMDEDF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1621 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 IPR000358 GO:0009263
Apr4g1621 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Apr4g1621 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 - -
Apr4g1621 329 Coils Coil 218 238 - -
Apr4g1621 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Apr4g1621 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Apr4g1621 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Apr4g1621 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1621 Apr-Chr4 18605561 18606676 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1621 K10808 - gmx:100790224 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1621 4 18605561 18606676 Apr4g1621 4 18605561 18606676 ECH