Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1618 ATGGGCCATGACTCGCTCATGTGGGACACGTTCAATCCACGTGGCACGACGTTGTTCCTCGAGGAGGATCCTAAGTGGACCCGCACTTACCTCCAACGCTTCCCTATCTTACGCGCTCAGACAGTGAGTTACAACACGCGCATCTCCGAGGCCAAGACCCTATTGTCCTCTTATAAGAAAGATTGTGGCAACACCACCACCGGTCACCCCCTGAAGGGTAACCGGCGGTGTAAGCTGGCACTAAATGAGCTGCCTGATGAAGTCTATGATCGAGATTGGGACGTGATCATGATCGATGGACCCAGGGGATATTTTGCGGCGGCGCCGGGGAGGATGGCGGTGATATATTCGGTGGCGATGATGGCGCGTGGAAGAAAAGGATCGGGTGTGACGCACGTGTTTCTTCATGACGTGGATAGGGAAGTGGAGAAACGGTATGCCATGGAGTTTTTGTGCATGAAATATAGGGTTGGGGGTATTAGGAAGCTTTGGCACTTTGTTATTCCACCCGTTGTTAATGTTAGTGATATCTCTCATGGATTTTGCTGA 549 0.5155 MGHDSLMWDTFNPRGTTLFLEEDPKWTRTYLQRFPILRAQTVSYNTRISEAKTLLSSYKKDCGNTTTGHPLKGNRRCKLALNELPDEVYDRDWDVIMIDGPRGYFAAAPGRMAVIYSVAMMARGRKGSGVTHVFLHDVDREVEKRYAMEFLCMKYRVGGIRKLWHFVIPPVVNVSDISHGFC* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1618 182 Pfam Polysaccharide biosynthesis 1 166 IPR021148 -
Apr4g1618 182 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 1 176 IPR006514 GO:0045492
Apr4g1618 182 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 182 - -
Apr4g1618 182 PANTHER OS11G0490100 PROTEIN 1 182 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1618 Apr-Chr4 18547391 18548038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1618 - - aprc:113862281 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1618 4 18547391 18548038 Apr4g1618 4 18547391 18548038 ECH