Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1588 ATGTGTTTGGTTGCTGAGAAAAGAAAACGAACGAATTGCCACAGTGAGATGCCGGAGGAAGAAGTAGTGGAGCTCAAGTTCCGTCTCTACGATGGATCCGATATAGGACCCTTTCGTTACTCGCCTACTTCCACCGTCGCTATGCTCAAGGACCGGATTTTCGCTGAGTGGCCCAAAGACAAGAAAATTATACCAAAGGCAGCAAATGATATAAAACTAATAAGTGCTGGCAAAATTTTGGAGAACAACAAGACAGTTGGCCAATGTAGAGTACCGTTTGGTGAACTTCCTAAAGGGGTTATAACCATGCATGTCGTTGTCCAGCCATCTTTGCTTAAAGCAAAAACAGAGAAGAAAGTTGATGAGGCGCCCAGAAAACATATATGTGCATGTTCGATATTGTGA 405 0.4346 MCLVAEKRKRTNCHSEMPEEEVVELKFRLYDGSDIGPFRYSPTSTVAMLKDRIFAEWPKDKKIIPKAANDIKLISAGKILENNKTVGQCRVPFGELPKGVITMHVVVQPSLLKAKTEKKVDEAPRKHICACSIL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1588 134 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 17 134 - -
Apr4g1588 134 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 17 134 IPR040015 -
Apr4g1588 134 PIRSF MUB 14 134 IPR017000 -
Apr4g1588 134 ProSiteProfiles Ubiquitin domain profile. 23 91 IPR000626 GO:0005515
Apr4g1588 134 SUPERFAMILY Ubiquitin-like 17 111 IPR029071 -
Apr4g1588 134 CDD Ubl_MUBs_plant 23 109 - -
Apr4g1588 134 Gene3D - 8 116 - -
Apr4g1588 134 Pfam Ubiquitin-2 like Rad60 SUMO-like 22 132 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1588 Apr-Chr4 17830045 17848229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1588 - - gmx:100500075 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1588 4 17830045 17848229 Apr4g1588 4 17830045 17848229 ECH