Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1586 ATGCACTACCAAGCGGCATCATGGGGAAGCTACGTGAGCCCAAGGAACACAGTAGTGGGGGACCCACTGGAGCGCATAGAGAGGTTGGCGTCGGAGAACGCGGTGGTGATATTCAGCATGAGCACGTGCTGCATGTGCCACGCCATAAAGAGGTTGTTCTGTGGAATGGGAGTGAACCCAACGGTGCATGAGTTGGACGAGGACCCACGAGGGAAGGAGCTAGAGAGAGCCTTGATGAGGCTTCTTGGTACCCCCTCTGTCCTCCCTGTTGTCTTCATTGGTGGTAAACTTGTTGGCCCCATGGACCGAGTCATGGCTTGCCATATCAATGGCTCTCTTGTCCCTCTCCTCAAAGAAGCTGGTGCTCTCTGGCTCTAA 378 0.5503 MHYQAASWGSYVSPRNTVVGDPLERIERLASENAVVIFSMSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKELERALMRLLGTPSVLPVVFIGGKLVGPMDRVMACHINGSLVPLLKEAGALWL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1586 125 TIGRFAM GlrX-like_plant: glutaredoxin-like family 26 125 IPR011905 -
Apr4g1586 125 Pfam Glutaredoxin 35 98 IPR002109 -
Apr4g1586 125 ProSiteProfiles Glutaredoxin domain profile. 23 124 - -
Apr4g1586 125 PANTHER GLUTAREDOXIN 4 124 IPR011905 -
Apr4g1586 125 PANTHER GLUTAREDOXIN-C5 4 124 - -
Apr4g1586 125 SUPERFAMILY Thioredoxin-like 23 124 IPR036249 -
Apr4g1586 125 Gene3D Glutaredoxin 20 124 - -
Apr4g1586 125 CDD GRX_GRXh_1_2_like 34 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1586 Apr-Chr4 17775780 17776157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1586 1 125 Miscellaneous Gene Families AT3G02000 63.971 7.59e-51 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1586 K03676 - gmx:100808865 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1586 4 17775780 17776157 Apr4g1586 4 17775780 17776157 ECH