Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1575 ATGAAGTCCTCTCTCAGCAAGTTGAGGAAAATTGCACTTCACAAGAGCGTTCCCAAGGACAAGAAAGACTTTCACCCCTCCGTTAAGTTCGACGACCTCGCTCTCGCCGCCAAGGACATGCAAGATATGAGAGATTGCTATGATAGCTTGCTTTCTGCAGCTGCTGCTACACAAAACAGTGCTTACGAATTTGCTGAGTCGCTGCAAGAAATGGGTACTTGTCTGCTCGAGAAAACTGCCTTAAATGATGATGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTTGAACTTCAGAAGCTTGTTGATAGCTATCGTTCTCACATAGTAATGACAATAACCAATCCGTCAGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGGCAATGTGATGAAAAAAGAGATGTATATGAATACATGATTGCCCAACAGAAAGAGAAAGGAAAGTCAAAAAGTAGCAAAGGTGAAAGTTTCACTTTACAGCAGTTACAAGCAGCTCATGATGAATACGAAGAGGAAGCAACACTCTGTGCTTTTCGGTTGAAGTCCCTGAAACAAGGCCAGTCACGTAGTCTCCTAACACAAGCAGCTCGTCACCATGCTGCTCAGTTGAATTTTTTTCGGAAAGGACTTAAATCACTAGAGGCTGTTGAACCACATGTTAGGATGGTTGCTGAACAGCAACATATTGATTACCAATTCAGTGGCCTTGAGGATGGTAATAATGACGATGAAAATGACTTTGAGGTCATTGAAGGTGGTGAGTTAAGTTTTGACTACAGATCAAATAAGCAAGGGTCATATATTGTTTCCACATCACCAAACTCAGCAGAGGTTGAAGAATCGGGTTGTTCATATGTTCAATCTTCAGCCACAGAAACTGCAGAGACAAGTTTAGACAAGAACCAAGGAGAATTTAAAGTCTCAAATAGAGATCCTAGAGTCAGCAGTTATTCAGCTCCAATAATTGCAGAAAAGAAATTTGATCCTGCTGAAAAAGTAAGACAAATGTTATCATCAACTGCAGCAAAGTCCAATGCGTATGTACTTCCAACACCTGTACACAACAAAGAAACAAAAACTAGCTCAGCTCCCCGCACGAGTGCAAGTGGATCTTTGCATAATTTGTGGCATTCTTCACCTTTGGATGAAAAAAAGAATGAAAAAGATTTTGTTGATAGTAAATTGTCAGAACCAACTATCCCTAGAGCTCACTCTGTTCTCAAAGAAAGCAACAGTGATACTTCATCCACCCAGTTACCACGCCCCTCAGCAGAGGGACTATCACTTCCACAAGTTGATCTTTTCAGTGCTTCTGATACAAAGAAAATAAAAAGACAAGCTTTTTCTGGTCCATTGAGTAATAAGCTACTATCAGTAAAACCTGTTTCTGGAGGTTTTCCACGTTTACCGGTGCCCCAGCCTTCATCTCCAAAAGCATCTCCTAGTGCTTCACCTCCCCTTGTTTCTTCACCTAGGATAAGTGAGCTTCACGAGCTTCCTAGACCCCCTGGCAATCAGTCCAGCAAGCCAATGAAATCTTCTCGAGTTGGTCACTCTGCTCCATTAGTATTCAGAAATCCAGAGCATGCTGCGACTAGTAAATTTCCTACAGTTGTATCCAGTACAGCATCTCCACTTCCAACTCCACCTATAATTGTCTCTCGAAGTTTTTCTATACCCTCTAGTAGTCAGAGAGCTATGGCATTGAATGTTTCTAATACTAAGTATTTGGATACACCCCAAGTTCCAGAGAAGGTCGAAGAAGCTACATCACCTCCACTAACTCCTATATCCCAGAGAGCATCAAATATATCTGACCTGGCTTCTCACTCTAGTGAAATCCGAGGTGGGAGATAA 1881 0.4189 MKSSLSKLRKIALHKSVPKDKKDFHPSVKFDDLALAAKDMQDMRDCYDSLLSAAAATQNSAYEFAESLQEMGTCLLEKTALNDDEESGKVLGMLGSVQLELQKLVDSYRSHIVMTITNPSESLLNELRTVEDMKRQCDEKRDVYEYMIAQQKEKGKSKSSKGESFTLQQLQAAHDEYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMVAEQQHIDYQFSGLEDGNNDDENDFEVIEGGELSFDYRSNKQGSYIVSTSPNSAEVEESGCSYVQSSATETAETSLDKNQGEFKVSNRDPRVSSYSAPIIAEKKFDPAEKVRQMLSSTAAKSNAYVLPTPVHNKETKTSSAPRTSASGSLHNLWHSSPLDEKKNEKDFVDSKLSEPTIPRAHSVLKESNSDTSSTQLPRPSAEGLSLPQVDLFSASDTKKIKRQAFSGPLSNKLLSVKPVSGGFPRLPVPQPSSPKASPSASPPLVSSPRISELHELPRPPGNQSSKPMKSSRVGHSAPLVFRNPEHAATSKFPTVVSSTASPLPTPPIIVSRSFSIPSSSQRAMALNVSNTKYLDTPQVPEKVEEATSPPLTPISQRASNISDLASHSSEIRGGR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1575 626 MobiDBLite consensus disorder prediction 475 489 - -
Apr4g1575 626 Gene3D Arfaptin homology (AH) domain/BAR domain 31 243 IPR027267 -
Apr4g1575 626 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 614 IPR037488 -
Apr4g1575 626 MobiDBLite consensus disorder prediction 475 529 - -
Apr4g1575 626 CDD BAR 39 227 - -
Apr4g1575 626 MobiDBLite consensus disorder prediction 301 321 - -
Apr4g1575 626 MobiDBLite consensus disorder prediction 591 626 - -
Apr4g1575 626 MobiDBLite consensus disorder prediction 356 435 - -
Apr4g1575 626 MobiDBLite consensus disorder prediction 600 618 - -
Apr4g1575 626 MobiDBLite consensus disorder prediction 386 403 - -
Apr4g1575 626 MobiDBLite consensus disorder prediction 413 432 - -
Apr4g1575 626 SUPERFAMILY BAR/IMD domain-like 31 229 IPR027267 -
Apr4g1575 626 MobiDBLite consensus disorder prediction 362 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1575 Apr-Chr4 17358823 17367643 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1575 - - gmx:100775799 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1575 4 17358823 17367643 Apr4g1575 4 17358823 17367643 ECH