Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1547 ATGAGCAAAACGCCAATGAGGCCGCACAAGCAGGTATCCTCCGTGAACAATAGTTTCCGGCGACCCACGATTCTTTATCTGGTGTGTGCCGCTGCATTATTTTCCCTCCTCCTCTTTTCCATCCAATCCTCTTTCTTCGCAGGCTCCTTCAATTCAGATCGAGACTCCGAAACAATTCGTGCTTTGTCTAACTTTCAGTCCAGTGTTAAGCAATGCGTGGATCACAGGGGGCTTGGACTCACTGCACATATAATTGACCACTGCAAATTGGTCCTGAAATACCCCGAAGGTACCAACAGCACTTGGTACAATGCGCAATTTAAACAATTTGAGCCTTTGGAGTACAACTATGACGTCTGTGAGGCAATTCTATTGTGGGAACAGTATCGTAACATGACTACGGTGTTGACCAGAGAGTATCTTGATGCTCGCCCTGGTGGTTGGGAAGATTATGCTCCACAAAGGATAGCGCAATTGGGGACAAAGAAGTGCTATAATAAGACTCTTTGTGAAGAGAACCTCAATATATTATTACCTGCAAAGCCCCCCTTTCATCCACGGCAGTTTCGTACTTGTGCTGTTGTTGGAAACTCAGGAGATCTTCTGAAGACAGAATTTGGGAAAGAAATTGATAGTCATGATGCTGTTTTTCGAGACAATGAGGCCCCTGTTAATCAGAAATATGCCAAGTACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTGCTGCTCGTAACATGGTCCCTATTCTAAATGGGTCTGATGATGAGGTTCTAATTATCAAAAGTCTGACGCACAGAGATATCAATGCAATGATAAAAACTATACCCAATCCAGTCTATCTCTTCCAAGGAATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTGGCGCTCTCCATGTGTGATATTATTGATATATATGGTTTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTGCTCCAAGGAAGGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGGGGTACTCAGGATTCACTCCCCCATGAGATCTAAGAGGAGGCAAGACTGGTCGGATATACCAAGTAGAGAAATGATAAGCCAAGCACATGCTGCAACTTTGCGCTTGAGAAGGGGTCAAGCTGGTCAGGACAGTGATTTAGGTCCTTTTGGCAGTTGTAAGGTGTGGGGCAATGTGGATCCAGACAAAAGTGGGCCTATCTCAGGATCACCAGACATGAGTGATGTCAGGAAATATTCAAATTACAGTAAATGGGAAGTCATGCCTTTTGAGAGTTTAAGGAAAGAAGCAAAGGATTATTATAACCAGATGCAAGGGGTCTCTCTGTATAAAATGGATGGCAATAAGTTGGATGATCTAGTCTGTGTCAAACATTCCTTAAATTCTGAGGTGTAA 1452 0.4346 MSKTPMRPHKQVSSVNNSFRRPTILYLVCAAALFSLLLFSIQSSFFAGSFNSDRDSETIRALSNFQSSVKQCVDHRGLGLTAHIIDHCKLVLKYPEGTNSTWYNAQFKQFEPLEYNYDVCEAILLWEQYRNMTTVLTREYLDARPGGWEDYAPQRIAQLGTKKCYNKTLCEENLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDSHDAVFRDNEAPVNQKYAKYVGLKRDFRLVVRGAARNMVPILNGSDDEVLIIKSLTHRDINAMIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSAPRKGHNPLQGRAYYQLLECLGVLRIHSPMRSKRRQDWSDIPSREMISQAHAATLRLRRGQAGQDSDLGPFGSCKVWGNVDPDKSGPISGSPDMSDVRKYSNYSKWEVMPFESLRKEAKDYYNQMQGVSLYKMDGNKLDDLVCVKHSLNSEV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1547 483 Pfam Glycosyltransferase family 29 (sialyltransferase) 174 250 IPR001675 GO:0006486|GO:0008373
Apr4g1547 483 Gene3D Glycosyl transferase family 29 126 359 IPR038578 -
Apr4g1547 483 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 17 482 IPR044782 GO:0008373|GO:0009846|GO:0009860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1547 Apr-Chr4 16840087 16846228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1547 75 354 Glycosyltransferase AT1G08660 87.143 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1547 - - gmx:100800355 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1547 4 16840087 16846228 Apr4g1547 4 16840087 16846228 ECH