Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1535 ATGTTGAGGGTTGCAGCTAAGAGGCTTTCCTCTCTCTCCATGTGTCCATGGAGGCACAACCACGCCGCTTCCGTGTTCTTCTCTCGGAGCTCCATCGCACCCACCTCTTCTTCCGAGGAACGCAGATCCGACCCGTTATCGCTTCAACCCGAATTCTTTCTTCCCTTCAGAGGTTTTGCTACTGAAACACTGGTCCACACAAAAGAAAACAGCATTATTCCTGAAATTCCAGCAACTGTGACAGCTGTTAAAAACCCTTCTTCTAAGATTGTATATGATGAACACAACCATGAACGATTTCCTCCTGGTGACCCAAGCAAGAGGGCATTTGCGTATTTTGTCCTTACAGGTGGTAGGTTTGCATATGCATCTCTAATTCGTCTCCTTATCATCAAGTTTGTGCTCAGCATGTCAGCAAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAAGTTGATCTCTCTAGCATTGAGCCAGGCACTACCGTGACTGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGCAGAACTGAAGATGATATTAAGCTGGCAAACAGTGTTGATGTTGGATCTCTGCGTGATCCCCAGCAGGATGCAGATAGAGTCAAGGACCCAGAATGGCTCATTGTGATTGGGGTTTGCACACATCTGGGTTGCATTCCCTTGCCAAATGCTGGGGACTTTGGGGGATGGTTCTGCCCGTGCCATGGTTCACATTATGATATATCTGGCAGAATTAGGAAAGGACCAGCACCATACAATCTGGAGGTACCAACCTATACCTTCTTGGAGGAAAACAAGTTGATGATTGGTTGA 816 0.4706 MLRVAAKRLSSLSMCPWRHNHAASVFFSRSSIAPTSSSEERRSDPLSLQPEFFLPFRGFATETLVHTKENSIIPEIPATVTAVKNPSSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFAYASLIRLLIIKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1535 271 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 181 269 IPR017941 GO:0051537
Apr4g1535 271 Gene3D - 140 271 IPR036922 GO:0051537
Apr4g1535 271 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 271 IPR014349 GO:0051537
Apr4g1535 271 SUPERFAMILY ISP transmembrane anchor 88 144 - -
Apr4g1535 271 Pfam Ubiquinol cytochrome reductase transmembrane region 93 142 IPR004192 GO:0008121
Apr4g1535 271 PRINTS Rieske 2Fe-2S subunit signature 209 220 IPR005805 GO:0016020|GO:0051537
Apr4g1535 271 PRINTS Rieske 2Fe-2S subunit signature 231 243 IPR005805 GO:0016020|GO:0051537
Apr4g1535 271 PRINTS Rieske 2Fe-2S subunit signature 243 255 IPR005805 GO:0016020|GO:0051537
Apr4g1535 271 CDD Rieske_cytochrome_bc1 148 271 - -
Apr4g1535 271 SUPERFAMILY ISP domain 133 270 IPR036922 GO:0051537
Apr4g1535 271 Pfam Rieske [2Fe-2S] domain 154 257 IPR017941 GO:0051537
Apr4g1535 271 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 271 - -
Apr4g1535 271 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 128 271 IPR006317 GO:0008121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1535 K00411 - gmx:100806917 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1535 4 16636082 16638878 Apr4g1535 4 16636082 16638878 ECH