Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1528 ATGGCTGTTTCTTATGTTCACATGGTTCAATCTGCCAGGGGTTTCCACAAGGGAAACCTCTCCTATCCCAGATGCAGTTACAAGCCCCGCGTAGTTCTTGCTTCTATGCATTTGTCAGACCCTAAGGTAGACTCATTCTTGGACAGTGTAAAATGGGATAATAAAGGATTGGCTGTGGCAATAGCTCAAAATGTTGATACAGGGGCCATATTAATGCAAGGTTTTGCAAATAGAGAAGCAGTGGCTACAACCATATCTTCTCGAAAGGCCACATTCTATAGCCGGTCACGATCAACATTGTGGACCAAAGGAGAGACCTCTAATAATTTTATCAATATTCATGATGTCTTTCTTGATTGTGATCATGATTCGATAATATACCTTGGGAAACCTGATGGGCCTACCTGCCACACAGGGTCAGAAACATGCTATTATACATCAGTGTTTGACTTGTTAAAACATCAAGAGGCTCAAGGAAATAAATTGGCTTTGACCTCTTTGTATGAGTTAGAGACAACGATCTCCCAACGCAAGGCAGAGTTGGCACAAGAAAACGGAAAGCCTTCATGGACAAAGCGCTTGTTGCTTAATGATAAGTTGCTGTGCTCTAAAATCAGAGAAGAGGCAAATGAATTGTGTCAAACACTAGAGAATAATGAGGACAAGTCACGTACTGCGTCAGAGATGGCTGATGTACTCTATCATGCCATGGTTCTGTTGGCACAGAAAGACGTCAAAATAGAAGATGTTTTGCAGGTTCTTAGGCAGAGATTTTCCCAATCTGGTATTGAGGAAAAAAGAAGTCGTGTACCCGAGAAACCGGTGGATGATTGA 834 0.4209 MAVSYVHMVQSARGFHKGNLSYPRCSYKPRVVLASMHLSDPKVDSFLDSVKWDNKGLAVAIAQNVDTGAILMQGFANREAVATTISSRKATFYSRSRSTLWTKGETSNNFINIHDVFLDCDHDSIIYLGKPDGPTCHTGSETCYYTSVFDLLKHQEAQGNKLALTSLYELETTISQRKAELAQENGKPSWTKRLLLNDKLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLAQKDVKIEDVLQVLRQRFSQSGIEEKRSRVPEKPVDD* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1528 277 Pfam Phosphoribosyl-AMP cyclohydrolase 72 145 IPR002496 GO:0000105|GO:0004635
Apr4g1528 277 PANTHER BNAC05G24080D PROTEIN 41 269 - -
Apr4g1528 277 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 48 259 IPR023019 GO:0000105|GO:0004635|GO:0004636
Apr4g1528 277 SUPERFAMILY HisI-like 47 149 IPR038019 -
Apr4g1528 277 SUPERFAMILY all-alpha NTP pyrophosphatases 167 259 - -
Apr4g1528 277 Coils Coil 202 226 - -
Apr4g1528 277 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 41 269 - -
Apr4g1528 277 CDD NTP-PPase_HisIE_like 167 254 IPR008179 GO:0000105|GO:0004636
Apr4g1528 277 Gene3D - 41 136 IPR038019 -
Apr4g1528 277 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 168 257 IPR021130 -
Apr4g1528 277 TIGRFAM histidine_hisI: phosphoribosyl-ATP diphosphatase 167 254 IPR008179 GO:0000105|GO:0004636
Apr4g1528 277 Gene3D - 164 259 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1528 K11755 - gmx:100807276 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1528 4 16481322 16485846 Apr4g1528 4 16481322 16485846 ECH