Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1526 ATGTACGAACCGAACAGGAAAACGCCTCGCTCACCTCCACCTTCAACATCACGAGTTCAACTTCATCCAAGTACCCCCGAAATTCCCATTCGCTGTTCTCCAAACCTTGCAAAACGAATGCAAGGAGACACATGTTACGTGTGTCACCAACAAGGACATTGGTCTTGGTATTGTCCTTTAAAATCCCTCAGCCCCAAAAAGCCCCTCCTCTCATCCCCACCCAAACACGAGTCCCAAGTTTCCCCTATCATGATACTGTGTCGTTGTGGCCATGGATTTTGCGAGATCAAACCCTCACACAGCGACAGGAACTGGGGCAGGAAGTACTACGCATGCCCCATCAAAAGGGGGGCAAAGTGTAAAGATTTTGTGAAGTGGTGCGATGATCGCGTTGATGATAGTGATTTGCAGCCTCCAGTGTTTAAGTATCCTGAGTGTGAATGTGGAGCTGGAGTGTGTAGAAGGGTTAAGGGTAGAGAGAACACTGATCATGCGTTTAAGTACTTTTTTGTTTGCCCTGTTAAACGGGATCATGGATCTTGTGGTTACTGTGTGTCGGAGGATGAATTGCTTAATAGAGAAAGCATTGTTCCTACGAGGCAAGGAAGGCAAAGGTCACTTCTGGATTTTTTTGAGGGACACCAAAATGATAATACTGACAGTGACATGGTTACTGACTTGGGGGAGGGAGATGGTTTACTAGTACAGGCCAAAAGGATGAGAGTCATGGACAGTTATGAGAATCCCTTATCGATTGCCGTATCCGAGATTCCAGAGGAAGAAGATGCAGGCGCAGCAGTAAGGGCAGCCACTTCAGAACATGTTGGTTTTCCCGAATTTGAGGTTGCCGATGATGATATAGAATTTACAAACTCAGTATCATGGGAGAGCATTGAGGCAGAAGCTCTTGTATTATATCGTATGTCAACATCTTCAAGGATCCAACGACAACAGAGATTGTTTCAGAGGCGCAACTTTGTTGATACTTCATTTTGTTCTTGTCCAATGGGTTGGCTAGGACGCCTTCTTTTCTTCTATCCAACACACAGCTTGAAATTCCCCACACCTGGGCCATTTTTCTGCTGTGTTTTCCCATCCTTTGATCCAATAGTTGTTCCTAAACAGACCATTATTCCTGATGGTCCTTATGAACACAACCAGCTTGCTATTAGCAATGTTAGTCAACATACCCAACTTTCAACCGGTTGCCATACTGAGGTTTCTCGTGATGTAGTTAGTCCCGATAAATCACAGGGTGAAAGAAAGTCAATTATGTCAAAGGCACAACGGCATAGAGAAGTGGTCTTGTTTACACAGCAACGCCTTCTCATTGATCTGGAGACCTTGGATCCTCGCGAGCATGAGTCCATGAGAGAGGCAGCAGAAACAACATTTGAATTATTAAATAGTTTAGGAGTTTATTATAAACAATTTTCTGATCATGTCATGGACTATATCAATTTTGCATCATCAATTGCAGAAATAGACAAGTCCATGGAAAATTCCCTTACTATAGAGGAGCACAATAAACTCTTTGAGGAGGAGAAAATGAGATATTCTCATATCCAAGACAACTATGCCAAGACTGAGGCTATGCTCGATGCATCGAATCACCACAAACAATTGCTTTGTGAACAGGTCTCTAATCTCAAGGCCATGCTCCATGAAAAGCAAAACCAATTGAAATCTCGTGAGTTGGAGACCTTGAAGATAGAGAATGATCTTGGTGATCTGAAAAGAATTATGTTGGCGGCTGACATAACATTGAAGGAAAGAGCTGAGCAATCAGAAATAGCAAGGAAACGAAGCGAAGAGAGAGGAGCAAAGCAAATTGCAGCAAAGGCATCACTGGAGAAGGCCAAACTTGAATTGGAAAATTAA 1881 0.4333 MYEPNRKTPRSPPPSTSRVQLHPSTPEIPIRCSPNLAKRMQGDTCYVCHQQGHWSWYCPLKSLSPKKPLLSSPPKHESQVSPIMILCRCGHGFCEIKPSHSDRNWGRKYYACPIKRGAKCKDFVKWCDDRVDDSDLQPPVFKYPECECGAGVCRRVKGRENTDHAFKYFFVCPVKRDHGSCGYCVSEDELLNRESIVPTRQGRQRSLLDFFEGHQNDNTDSDMVTDLGEGDGLLVQAKRMRVMDSYENPLSIAVSEIPEEEDAGAAVRAATSEHVGFPEFEVADDDIEFTNSVSWESIEAEALVLYRMSTSSRIQRQQRLFQRRNFVDTSFCSCPMGWLGRLLFFYPTHSLKFPTPGPFFCCVFPSFDPIVVPKQTIIPDGPYEHNQLAISNVSQHTQLSTGCHTEVSRDVVSPDKSQGERKSIMSKAQRHREVVLFTQQRLLIDLETLDPREHESMREAAETTFELLNSLGVYYKQFSDHVMDYINFASSIAEIDKSMENSLTIEEHNKLFEEEKMRYSHIQDNYAKTEAMLDASNHHKQLLCEQVSNLKAMLHEKQNQLKSRELETLKIENDLGDLKRIMLAADITLKERAEQSEIARKRSEERGAKQIAAKASLEKAKLELEN* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1526 626 Coils Coil 612 626 - -
Apr4g1526 626 Gene3D - 37 69 - -
Apr4g1526 626 Pfam GRF zinc finger 86 129 IPR010666 GO:0008270
Apr4g1526 626 SUPERFAMILY Retrovirus zinc finger-like domains 38 61 IPR036875 GO:0003676|GO:0008270
Apr4g1526 626 Coils Coil 540 567 - -
Apr4g1526 626 MobiDBLite consensus disorder prediction 1 27 - -
Apr4g1526 626 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 167 626 - -
Apr4g1526 626 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 13 161 - -
Apr4g1526 626 PANTHER OS07G0190500 PROTEIN 13 161 - -
Apr4g1526 626 PANTHER OS07G0190500 PROTEIN 167 626 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1526 - - gmx:100802558 700.664