Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1521 ATGCAAGAGCTTTTAGATGCTCCTTTATGCTCAACCAATGCTTATGAAAGCTTGTTCTATGTCTGTTGTGCTCAAGATTTAGAGTTTGGGTACGATTTCGATTTGTCTTTTCTAGAATCTATGTCTTCTGTGCCAGCACGAACGGGGCGACAAAGACAGCGTTATGAAGACAACTTGCGCCTTGTCTCTGGATGTATTCCCTATAGATGGACAAAGGACAACACAGATCAAATGGGAGAAACTGAGGAGATAATTGAAGTACTTATGGTTTCTTCACCAAAACGCGATGATCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACGGAAGCTGCTTGCCGTGAAGCCCTAGAGGAAGCAGGAGTTAAAGGTGTACTGAGAGAAATTCCTTTAGGAATATGGGAGTTCAGAAGCAAAAGTAGTCAGGACTTGTGTAGCATGGAAGGAGGTTGCAAAGGGTACATGTTCGCCTTGGAGGTGACTGAAGAACTTGAGACTTGGCCGGAGCAGAAAAACCGTACTCGCCAGTGGTTAAACATAGAAGAGGCATTCAGACTCAGCCGATATGACTGGATGTCTAATGCACTCGAGGAGTTTTTGAGAGTTATGGAAGAGGATAGAAAACTTGAGAAGAAAGACCAGAATGTCGAACCCCCTTCAATTATAGTAGCAGATGTGTCAGAATGTCAAAGTATGCCTCACAACTGCTATAAAAGATCCTCTACAATGCAGCACCATGGTATGCCTCCTAAAGCCAATCTCCTGTCACGTGCCTCTCAAGAGATAGCCATCCACTTTGGTTATTGA 816 0.44 MQELLDAPLCSTNAYESLFYVCCAQDLEFGYDFDLSFLESMSSVPARTGRQRQRYEDNLRLVSGCIPYRWTKDNTDQMGETEEIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGVLREIPLGIWEFRSKSSQDLCSMEGGCKGYMFALEVTEELETWPEQKNRTRQWLNIEEAFRLSRYDWMSNALEEFLRVMEEDRKLEKKDQNVEPPSIIVADVSECQSMPHNCYKRSSTMQHHGMPPKANLLSRASQEIAIHFGY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1521 271 ProSitePatterns Nudix box signature. 103 124 IPR020084 GO:0016787
Apr4g1521 271 SUPERFAMILY Nudix 53 210 IPR015797 -
Apr4g1521 271 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 45 205 - -
Apr4g1521 271 CDD Nudix_Hydrolase_9 61 195 - -
Apr4g1521 271 Pfam NUDIX domain 87 201 IPR000086 -
Apr4g1521 271 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 41 231 - -
Apr4g1521 271 ProSiteProfiles Nudix hydrolase domain profile. 58 203 IPR000086 -
Apr4g1521 271 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 41 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1521 Apr-Chr4 16249436 16254124 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1521 K07766 - gmx:100794003 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1521 4 16249436 16254124 Apr4g1521 4 16249436 16254124 ECH