Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1514 ATGCCGCTATCCACGACCGGCCCCTCGCCGTCACCGGCGTTAGAAGAAGAGCAGTCACCTCACGACGATGACGGTTATGACGTTAACAATGACGACGCTTCGTTCAGCGTCGTTTTACTGGACGAGGAGGGTTTCCCGTCACAAGCCCCCGGCGAAAACGGTTCACCAAGCGGATCGGAAACGGCGTCGGAAAAAAGCAGCTTCGCCGCTGATTTCTATCAATGCGGAACAGATTGGTCTTCGTTGTTGTCGCCAGAGGATCGTAGACACAGCGATCACGCGCGCGATTCGGGGAAGAAGCTGAAGCAGGGGAACCTGTTGCAGATTTGGGGGTTCAGAAGAAACAAGACCGTTGGTTCCGTTGAATCTGGACCCAATCAAAGTAGTTATTGTGGTGACGGAGGTGAGGGTTGTGTTTCTTCCGAGAGGAAGATTGTGAAACGTGGAAATTGGGGTTCGATTTTGCGTGACACGGGGAAAGTGTTTGAGAAGCCTAAATCTTCTAGCAAGCGAAAGGAACCCCATGCGGAAAATAGAGTTACACGTGCTTGTCCCTTTTATAAGAAAATCCCAGGGACAACCTTCACTGTTGATGCTTTTCGTTATGGGTGTGTTGAGGAGTGCTCAGCGTATTTTCTTAGTCATTTCCACTGTGATCATTATGGTGGCCTTAGCAAGAAATGGTCCCATGGCCCTATTTATTGCTCTCCTCTCACGGGACGGCTTGTTCAAATGTGTCTCTCGGTAAATCCTTTGTACATCTACCCTTTGGAATTTAACACTGAACACGTGATTGATGGTGTCAAAGTGACCTTGTTAGAAGCTAATCATTGTCCTGGTGCAGCTTTGATCCATTTTGACCTCCCAAATGGGCCATGTTATTTACACACTGGAGACTTCAGAGCATGTAAAAAAATGCAATCTTACCCTCTTCTTATAAATCAACGTGTGAATGTACTTTATTTGGATACCACATATTGCAACCCAAAATACAGGTTCCCTTCCAAAGAAGATGTACTAAATTATGTTGTCAAAATTACGAAGAACCACCTCAAAATGCATCCCAGAGCTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCACTCGGGGTGAAAATCTATGCCAATGCTTCAAGAAGGCGGATTTTGCTAGCTTTTGGTTGGCCCGACCTTTCAGATAGTCTCTGTACAAATGGAAATAAGACACTTCTCCATGTTCTGCCCATGTCATCTCTGAGATTTGAGACCTTAAAGAATTACTTGAAGACCTACAAGGAACAATTCACAGCGATATTGGCATTTCGTCCAACAGGTTGGACTTTCAGTGAGAAGATACGCAACGATCTGGAACTAATTAAACCTGTTTCCAAAGGAAATATCACGATATATGGGGTTCCCTACAGTGAGCACTCCAGCTTCAAAGAACTGCAAGATTTTGTTCAGTTTTTGAGGCCTGACAAGATAATTCCAACTGTGAATGTCGGGAATGCTGCTAATCGAGAAAAGATGCAATCCTACTTCCGAGACTGGTTGAAAGGATAA 1572 0.4497 MPLSTTGPSPSPALEEEQSPHDDDGYDVNNDDASFSVVLLDEEGFPSQAPGENGSPSGSETASEKSSFAADFYQCGTDWSSLLSPEDRRHSDHARDSGKKLKQGNLLQIWGFRRNKTVGSVESGPNQSSYCGDGGEGCVSSERKIVKRGNWGSILRDTGKVFEKPKSSSKRKEPHAENRVTRACPFYKKIPGTTFTVDAFRYGCVEECSAYFLSHFHCDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIYPLEFNTEHVIDGVKVTLLEANHCPGAALIHFDLPNGPCYLHTGDFRACKKMQSYPLLINQRVNVLYLDTTYCNPKYRFPSKEDVLNYVVKITKNHLKMHPRALVVVGAYSIGKECVYLAISKALGVKIYANASRRRILLAFGWPDLSDSLCTNGNKTLLHVLPMSSLRFETLKNYLKTYKEQFTAILAFRPTGWTFSEKIRNDLELIKPVSKGNITIYGVPYSEHSSFKELQDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWLKG* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1514 523 MobiDBLite consensus disorder prediction 1 67 - -
Apr4g1514 523 MobiDBLite consensus disorder prediction 50 67 - -
Apr4g1514 523 Pfam DNA repair metallo-beta-lactamase 401 506 IPR011084 -
Apr4g1514 523 Gene3D - 332 480 - -
Apr4g1514 523 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 84 522 - -
Apr4g1514 523 SUPERFAMILY Metallo-hydrolase/oxidoreductase 206 516 IPR036866 -
Apr4g1514 523 MobiDBLite consensus disorder prediction 81 100 - -
Apr4g1514 523 Gene3D - 190 502 IPR036866 -
Apr4g1514 523 MobiDBLite consensus disorder prediction 83 100 - -
Apr4g1514 523 CDD SNM1A-1C-like_MBL-fold 175 329 - -
Apr4g1514 523 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 84 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1514 Apr-Chr4 16130222 16134215 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1514 K15340 - gmx:100790844 842.802